| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_2243 |
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| Symbol | |
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| ID | 5209206 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 2764240 |
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| End bp | 2765646 |
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| Gene Length | 1407 bp |
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| Protein Length | 468 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640595844 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_001276572 |
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| Protein GI | 148656367 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGAAGT GTGTGACCAT TCCCGACATC GTCCCATCAA CTGCCGAAGC GGTGGCGCCT
GCGGTGCAAT CGGCGGGAAC AGGCAGTGCA ACCATTGACC GACCAGCGCT GCGTCGTCGG
GTGATGGGTC TGGCGTTGCC CGCCATCGGC GAAAACCTCC TCCACACAGC GCTTGGCATT
GCCGACACCA TTCTGGTCGC CGGAATTGGC GTCGTTGCGC TGGCAGGCGT CGGCGCGGCG
CTGAATGTGC TGTTCATCGT CATGGCAGCG CTGAGTTCGC TATCAGTCGG CGCGTCGGTG
CTGGTAGCGC AGGCAATTGG TGCAGGCAAT TCCTCGCGGG CGAGTCACGT CGCCGGTCAG
GCGCTGCTGT GGGGAATTGT GCTATCGCTG CCGATCACCC TCGCCGGGTT GATCTTTGCG
ACACCAGTCG TGGCGCTGTA CGGCATGGCG CCCGATGCCA CTGCCGTTGC GGCGGAGTAT
CTGACGATCA GCGCGGCGAG CATCCCGGCA CTGGCGCTCA TGCTGATCGG CGGGAGCGTG
TTGCGCGGCG CGGGTGACAG CCGCACACCC ATGCTGGTGA CAGCACTGGC AAATGTGCTG
AACCTGATCG CCTCATGGGG GTTGATCTAC GGGCATCTCG GCATGCCGGC GCTCGGTGTG
GCTGGTAGCG CCTGGGGCAC GCTGATCGCG CGCGTCGCAG GCGCTGCACT TTTCCTGGTG
ATCCTGCTGC GCACGAGCAC CCGCTTGCGC GTTGGCGGTC CCGGAACCTG GCGACCGCGC
TGGCGCACCG CGCGCGAGGT GCTCTGGCTT GGCGCGCCTG CGGCGCTGGA AGAGATCATC
ATCATCACAT CGTTTGCCGC ACTGACGCCG ATTGTCGTCG GGTTGGGCAC CGTGGCGCTT
GCCGCACATC GCGTGGCGCT GAATGTCCTC TCGCTCTCGT TCATGCCGGG GATCGGGTTC
AGCCTGGCGA CGACTGCGCT GGTCGGGCAG GCGGTCGGCG CCGGGCGGAT CGACGAAGCG
CGCGCGGTGA CAAATGTGGC GACGCGCTGG GCGATCATCT GGATGGGCGG GTTGGGGGTG
CTGTTCATCC TGTTTGCGCC GCAGATGGTC GGCATATTCA GCGGCGACCC GCAGTTGATC
GCCATTGGCG CTGCGGCAGT GCAGGTCGTC GCGCTGGCGC AGCCGTTGTG GGCGGGCACA
TTCGTTATTG GCGGCGCGCT ACGCGGCATC GGCGACACCC GCACACCAAT GGTCGTCTCT
GGTATTCTGG GATGGGCAGC GGTCGGCATC GCGCTGCTGC TCGTGTATGT CTGGCCCGCG
CTCTGGGCGG TATGGCTGGC GTACATCTTT ACCGGTCCGC CGGAGATCGG AGTGTTGTGG
CGCCTGTGGC GTCGTAAGGT GCGTTGA
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| Protein sequence | MEKCVTIPDI VPSTAEAVAP AVQSAGTGSA TIDRPALRRR VMGLALPAIG ENLLHTALGI
ADTILVAGIG VVALAGVGAA LNVLFIVMAA LSSLSVGASV LVAQAIGAGN SSRASHVAGQ
ALLWGIVLSL PITLAGLIFA TPVVALYGMA PDATAVAAEY LTISAASIPA LALMLIGGSV
LRGAGDSRTP MLVTALANVL NLIASWGLIY GHLGMPALGV AGSAWGTLIA RVAGAALFLV
ILLRTSTRLR VGGPGTWRPR WRTAREVLWL GAPAALEEII IITSFAALTP IVVGLGTVAL
AAHRVALNVL SLSFMPGIGF SLATTALVGQ AVGAGRIDEA RAVTNVATRW AIIWMGGLGV
LFILFAPQMV GIFSGDPQLI AIGAAAVQVV ALAQPLWAGT FVIGGALRGI GDTRTPMVVS
GILGWAAVGI ALLLVYVWPA LWAVWLAYIF TGPPEIGVLW RLWRRKVR
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