| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_2190 |
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| Symbol | |
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| ID | 5209153 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 2694483 |
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| End bp | 2700491 |
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| Gene Length | 6009 bp |
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| Protein Length | 2002 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640595792 |
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| Product | alpha-2-macroglobulin domain-containing protein |
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| Protein accession | YP_001276520 |
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| Protein GI | 148656315 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2373] Large extracellular alpha-helical protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.753636 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTCCGC TCTACCGCCG GTTTGCGATC CTGTTGATAC TTGCGGTGAC TCTCGCCGCA
TGCGGCGGAC CGCGCCCGCA ACCAACCCCA ACCCCGGTGA CTGCGCAACC CACTCCGGTT
GCCCCGCAAC GGGATATTCC CCCACCGCCG GATCGCGCGG CGCCGATCCT GGTCGCCCGC
TCGCCCGAAC CGGGACAGGC GCTCGATCCG GGCGCGCCGA TTGAACTGGT CTTCGACCGT
CCGATGGATC GCGCGTCGGT TGCGGCGGCG CTGAATATCG CCGGGGTGAC CGGCGCGATT
GAATGGCGCG ATGCGCGCAC GGTGCGCTTC GTTCCGTCCG CGCCACTGCA ACGCGCTTCC
ACGTATGAGG TGTTCCTGCG CGAAACGGCG AAAGGCGCGG ACGGCTTGCC ACTCGCGGCG
CCGGTGCGCT TCCGCTTCGC CACTGCTGGA TTCCTCGAGG TCGGGCAGGT GATCCCTGCT
GACGGCGCGG CTGATGTGCA GCCCAATTCG ACCATCACGG TCTTCTTCAA CCGTCCGGTT
GTGCCGCTCA CGGCGATCGA GTCGCAGGCG AACCTGCCGC AACCGGTGAC ATTCGACCCG
CCGATCGCGG GGCGCGGGGA ATGGCTGAAT ACCGCCATTT ATACGTTCGT CCCGGCAGCG
CCGCTTGCCG GCGGCGCGAC CTACACCGGA CGCATCGCCG CAGGTCTGAC CGATGTGACC
GGCAATCCGC TCCAGTCGGA GTACACCTGG CGTTTCACCG TCGCCCGTCC GCAGGTGGTG
ATGATTGACC CATCCGATGG CGCAACCCTT GTGCCACTGC AACCACGCAT CACGTTGCGC
TTCAATGTGC CGGTCGATCC TGCATCGGCG CGCGCCGCAT TTCGTCTGAG TCAGCCGGAT
GGCGCCCCTA TTCCTGGCGA TCTCCAGATT GACGGTGAGA CGCTGGTGTT CACGCCGTCG
CAGCGGCTGG ACTTCGAGAC GCGCTACACG GTCGAAGTGG CTGCCGGTCT GACGGGTGTT
TCCGGCGGTC TCGGCATGGC AAACGATTTT CGCGCAACCC TGCAAACGGT TCCACGATTG
CGCATTCTAG AGACCGATCC GCGCGATGGC GAGACGGATG CGCGGCGCGG CGGTTTGACG
ATCCGGTTCA ATGCGCCGGT CGATCCGGCG ACGGTGCTGC CGAATGTTGC GATCACGCCA
CAGCCGACGG AGGTGTACAC CTATTTCAAT GAGTATGACA ATACGTTCTT CATCAGTTTC
GACACGCGCC CTTCGACGGC GTATACGATT GCGATCGGAC CGGATATCGC CGATCCTTAC
GGGAGTCGCA CCGGTCAGTC CCTGACGGTG CGCTTCCGCA CTGCGCCGCT GGATCCATGG
GTCTATCCGC TGACACCCGG TTTCATCACG ACGTTCGACG CTAACCGCGC GCCCCGGATT
GCGCTGATGG CAACCAATGT CACCAGTGCG TCGCTGAGGC TCTACCGTCT GCCGATCGAG
GCGCTGCTGC GCCGCGACAT CCTCGGACCC GATGGTGCAT CCCCTGCTTC CGGCGCGACG
CTTGTGCGCA GCTGGCGCGA GCAGTTCAGC GTGCCGCGTG ATGAACCGAC GCCGGTGCGC
GTCGATCTGG TCGAGGGGGG TGGTCGCCTC GATCCTGGAC TGTACCTGCT GCTGCTGGAT
CTTCCCTCCG GCTATCCTGA GGCGCGAGTG CTGGCAGTGT CGCCGCTGCA CCTGACACTG
AAGGCGGCGG AACGCAATGC GCTGGTGTGG GCGAATGACC TGACGACCGG CGCGCCGGTT
TCCGGTCTGA CGCTGGAGTT GTTCGATGAG CAGGGCGGTT CGCTTGGAAC GGCGACCACC
GACGCGAATG GGGTGGCGAC GGCGACGCTC AACCGCACCC AATACCGTGG AATGATCGCA
GTGGCGCGGC AACCGTTCGC CATTTTCGGC GCAGACTGGA GCGCCGGCGT CAGCCCATGG
GATTTCAGCC TCCCGGCATC ATTCGATCTG CCAGAAGTCA TCGCCTATGT CTACACCGAC
CGCCCGATCT ATCGTCCCGG TCAGCGGGTG TGGTTCAAGG GCGCAGTGCG CGCCGATAAC
GATGTGCGCT ACACCCTCAT GCAGGGGTTG AACGCGGCGC AGGTCACGGT CTACGATGCC
GCTGGCGAAG CGGTCTTCCA GCAGGCGGTG AATCTGAACC AGAACGGCGC CTTCGACGGC
GGGTTCACGC TGGCGAATGG CGCGCCGACT GGTGAGTACG CTATCAGTCT GAATATCGGC
GGTCAGGTGT TCCGTTTCCC CTTCCAGGTC GCCGCTTACC GTCCGCCGGA GATCGAAGTC
ACGGTGACGC CGCGCGCTGC TGAGGTTGTG CGCGGCACGC CAACCGATGC GACGGTGCGC
GCCGGGTATT TCTTCGGCGC GCCAGCCGCG AACCTGCCGG TGCAGTGGAA TGCGCTGGCG
GAACCGTTCG CGCCTGCGCC CGATTGGGCA GGCAGGTACA CCTTCGGCGA ATATGGCGAT
CTGTGGATTT GCCGTTTCTG CTGGTGGGTT CCATCGCCTC CGCCGCAACC GATCCTCTCC
GGCAGCGCGA CGACCGATGC GCAGGGGGAG GCGATCATCA GTCTGCCGGG TGAACTGCGC
GACTCGGAAG GGAATGTCAT CACGCGCAGC GTGCGCCTCA CCGTCGAGGC GACCGTCACC
GGGCGCGACA ATCAGGCGAT CAGCGGGCGC AGCACCGTCA TCGTGCATGC CAGCGACCTG
TACGTCGGTC TGGCGCCGCG CGCGTATGTC GGCAGGGCAG GCGTTGCGCA GCAGATCGAT
CTGGTGACGA TCGACACACG CGGCAATCGT CTGGCAAACC GCACGGTCGA AATCGAACTG
GTGCGCACCA CGTGGGAGAA CCGCTTCGTG CAGGATGACG CTGGCGGACG GTGGGAATCG
CGCGAGGTGC GCGAGCCTGC CAGCACGCAG ACGGTCACGA CCGACGGGAA TGGCGATGCA
GTCATTTCGT TTACCCCCGA CAAAGGCGGC GCTTATCTGG TGCTGGCGCG CACACGCGAC
GCTGGCGGGC GCGAGGCGCG TTCATCGCTC TACGTCTGGG TGTACGGCGG CGATGCGCTC
TGGCTGCGCG AGAATAACGA CCGCATCAAC CTGATCGCCG ACAAAGGCGA GTATCGCCCC
GGCGAGACGG CGACCATCCT CATCCCCTCG CCGTTCACCG GACCGCACTG GGCGCTGCTG
ACCGTCGAGC GCGGCGGTGT GCTGAGCCAC GAGGTGCGCC GGGTCAGCGG CGGCAGCCTG
GTCTATCAAC TGCCGATCAC CCCAGAGCAC GCGCCGAACA TTTTCGTCTC GGCGGTGCTG
TTCGCGCCGC CCGACAGCAA TGGCGCACCG GCGGATTACA AGGTCGGCAT CCTGCCGCTG
AGCGTGACAC CCGTCCTGCA AACCTTGCAG GTCGCCGTGA CAACCACAAC GCCACAGGCA
GCGCCTGGCG ACACGGTGCA GTTTGAGGTG CGCGTCACTG ATGTGACAGG CGCGCCGGTG
GCGGCGGAAC TGTCGCTCGA CCTGGTCGAC AAAGCGGTGC TGTCGCTGCA ACCGCGCGAG
CCAGACGCGA TCGTGCAGGC ATTCTACGGT CGTCGTCCGC TGGGGGTGTT TACCGGCGCC
GGGCTGTCGG TCGCCGCCGA GCGATTCGAG CGGTTGCTGG ACGAGGCGCA ACGCAATGCG
CCTCCGGGCG CGGGCGCGGC TGGACCGGAG GCTGCCGTAC CGATGGTCGG GGCAGCGCCG
ACAGAAGCGC CGGCAGCGGC AATGCCTGCG CGCGCAGGAG ACGCCGCACT TCAACAGGGA
TTGACCATCC GCCAGGAGTT TGCCGATACC GCATTCTGGC AGGCGATTGT GGCGACCGAT
GCCAGCGGGC GCGCCAGCGT GCAGGTGACG CTGCCCGACA ACCTGACGAC GTGGGTGATG
CGCGGCGTGG CGCTCACCGC CGATACGCGC GTCGGCGAAG GGACCGGCGA ACTGATTAGC
ACCAAACCGC TGCTGATCCG TCCGGTCACG CCGCGTTTCT TCGTCGTCGG TGATGTGGTG
GAGCTGACGG CGAATGTCAG TAATCGCACG AATGCGCCAC TGGCGACAGA GGTGACACTG
GGCGCCGATG GGGTGACGGT CAACGCGCCA ATCACGCAGA CGATCCAGGT TCCGGCGAAC
GGCGAGGCGT CGGCGACCTG GCAGGTGACC GTCCTCGATG TCGAGGCGGT CGATCTGGTG
TTCAGCGTAG TATCCGGTCA GCTGAGCGAT GCGGCGCGAC CGCGGATCGC CAGCGCGCCA
GGTGGACGCA TTCCGGTCTA TCGCTACAGC GCACCGCAGA CGGTTGCGAC CGGTGGGCAG
ATCGACACGG CAGGCGCGCG GGTCGAGGCG GTGGCATTGC CGCCGAATGT CGATGCGCGC
CTGGGAGAAC TGCGCGTTCG GATCGATCCC TCGCTGGCAG CCGGCGTGCT CGACGGCTTG
CGGGCGCTGG AGGAATACCC GTATGAGTCG GTCGATGCAA CCGTGTCGCG CTTCGTGCCG
AGTGTGGCTG CGCTGCGGGC GCTGCGTCAG TTGGGCGTGG CGAATGCCGA ACTGGAGGCG
CGTTTGCCAG CGCTGGTGAC CGATGCGCTC GACCGGCTCT CCCTGTGGCA GAACGCAGAC
GGCGGATGGG GCTGGTGGGC GGAGGATGAG AGCAATCCGT ATATGAGCGC GTATGTAGTG
TTCGGCATGC TGCGCGCGCG CGAAGCAGGT TTCACCGTGC GTGATGATAC ACTGGCGCGC
GGGATGGAGT ATCTCGTCGC GCAACTCGCC GACGACGCCG ATGTGCGCAC TGTGCAGCAG
GCGAACCGGC AGGCATGGCT GCTCTACGTG CTTGCCGATG GCGGCAGACC GGACGGCAGA
CGGATGGATG CGCTCTACAA CAACCGCGAG CGCCTGGGCG TGTATGGCAA AGCGCTGCTG
GCGCTGGCGA TCCACCGCGT CAATGCCAGC GATGCCCGCC TGAAAACCCT GCTTTCCGAT
CTGAACAATT CTGCAATTGT GAGCGCGACC GGGGTCCACT GGGAAGAAGC CGGGCGAGAC
TATTGGGCGT TCAGCAGTGA CATGTGCAGT AGCGCGATTG CGCTCCAGGC GCTCGTGCGG
CTCGACCCGC AGAACCAGAT CATCCCCAAC GCCGTGCGCT GGCTCATGGT CGCTCGCCGC
GGCGACGCCT GGCTCTCAAC CCAGGAGTCG ACGTGGGCGC TGCTGGCGCT GACCGACTGG
ATGGCGCTGA CCGGCGAACT CAGCGGCGAC TACGACTATG CCGTCTGGCT GAACGGCAAC
GAACGCATCG CCGGTCGCAT CGACGCCACC AACGTCATGT CGCCGACGGT TGTGCGCATC
CCGACGACCG ACCTGTTGAC CGGCGATCCA TCGCTGGTGG CAGTGGGGCG CAGCGAAGGA
CCGGGGCGGC TGTACTACGC CGCGCACCTG AACCTTGCGT TGCCAGCCGA TCAGGTGCAG
GCGCTCGACC GGGGCATTGC CGTGACACGC CGCTATGTGG CGGCAGACTG CACCGACGGA
CCGCGTTGCC CCACGCTGAC CAGCGTCAAA GCTGGCGACA CCGTGCGGGT CGAACTCTCC
ATCGTTGCAG AGCGCGATCT CTCCTACGTG CAGGTGACAG ACCCACTCCC CGCCGGTGGC
GAAGCCATCG ACCCGACCCT GGCGACAACC GCGATCGCCA CACATGTCGG ACCGACACTC
CAACCGGCGC CGGACGCTAC GACGCCGTAC TTCTGGTGGT GGTGGCGCTG GTACGACCGG
ATTGAACTGC GCGACGAAAA GGTTGCACTG TTCGCCGATT ACCTGCCGCG TGGCGCCTAC
CTCTTCAGTT ACACCTTCCG CGCCGTGCAA CCCGGCGAAT ATCGTGTTAT TCCGACTATC
GCGCAGGAGA GTTTCTTCCC CGAAGTGTTC GGAAGGTCGG ATGGGCAACT GTTCACCATC
ACGCGGTAA
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| Protein sequence | MPPLYRRFAI LLILAVTLAA CGGPRPQPTP TPVTAQPTPV APQRDIPPPP DRAAPILVAR
SPEPGQALDP GAPIELVFDR PMDRASVAAA LNIAGVTGAI EWRDARTVRF VPSAPLQRAS
TYEVFLRETA KGADGLPLAA PVRFRFATAG FLEVGQVIPA DGAADVQPNS TITVFFNRPV
VPLTAIESQA NLPQPVTFDP PIAGRGEWLN TAIYTFVPAA PLAGGATYTG RIAAGLTDVT
GNPLQSEYTW RFTVARPQVV MIDPSDGATL VPLQPRITLR FNVPVDPASA RAAFRLSQPD
GAPIPGDLQI DGETLVFTPS QRLDFETRYT VEVAAGLTGV SGGLGMANDF RATLQTVPRL
RILETDPRDG ETDARRGGLT IRFNAPVDPA TVLPNVAITP QPTEVYTYFN EYDNTFFISF
DTRPSTAYTI AIGPDIADPY GSRTGQSLTV RFRTAPLDPW VYPLTPGFIT TFDANRAPRI
ALMATNVTSA SLRLYRLPIE ALLRRDILGP DGASPASGAT LVRSWREQFS VPRDEPTPVR
VDLVEGGGRL DPGLYLLLLD LPSGYPEARV LAVSPLHLTL KAAERNALVW ANDLTTGAPV
SGLTLELFDE QGGSLGTATT DANGVATATL NRTQYRGMIA VARQPFAIFG ADWSAGVSPW
DFSLPASFDL PEVIAYVYTD RPIYRPGQRV WFKGAVRADN DVRYTLMQGL NAAQVTVYDA
AGEAVFQQAV NLNQNGAFDG GFTLANGAPT GEYAISLNIG GQVFRFPFQV AAYRPPEIEV
TVTPRAAEVV RGTPTDATVR AGYFFGAPAA NLPVQWNALA EPFAPAPDWA GRYTFGEYGD
LWICRFCWWV PSPPPQPILS GSATTDAQGE AIISLPGELR DSEGNVITRS VRLTVEATVT
GRDNQAISGR STVIVHASDL YVGLAPRAYV GRAGVAQQID LVTIDTRGNR LANRTVEIEL
VRTTWENRFV QDDAGGRWES REVREPASTQ TVTTDGNGDA VISFTPDKGG AYLVLARTRD
AGGREARSSL YVWVYGGDAL WLRENNDRIN LIADKGEYRP GETATILIPS PFTGPHWALL
TVERGGVLSH EVRRVSGGSL VYQLPITPEH APNIFVSAVL FAPPDSNGAP ADYKVGILPL
SVTPVLQTLQ VAVTTTTPQA APGDTVQFEV RVTDVTGAPV AAELSLDLVD KAVLSLQPRE
PDAIVQAFYG RRPLGVFTGA GLSVAAERFE RLLDEAQRNA PPGAGAAGPE AAVPMVGAAP
TEAPAAAMPA RAGDAALQQG LTIRQEFADT AFWQAIVATD ASGRASVQVT LPDNLTTWVM
RGVALTADTR VGEGTGELIS TKPLLIRPVT PRFFVVGDVV ELTANVSNRT NAPLATEVTL
GADGVTVNAP ITQTIQVPAN GEASATWQVT VLDVEAVDLV FSVVSGQLSD AARPRIASAP
GGRIPVYRYS APQTVATGGQ IDTAGARVEA VALPPNVDAR LGELRVRIDP SLAAGVLDGL
RALEEYPYES VDATVSRFVP SVAALRALRQ LGVANAELEA RLPALVTDAL DRLSLWQNAD
GGWGWWAEDE SNPYMSAYVV FGMLRAREAG FTVRDDTLAR GMEYLVAQLA DDADVRTVQQ
ANRQAWLLYV LADGGRPDGR RMDALYNNRE RLGVYGKALL ALAIHRVNAS DARLKTLLSD
LNNSAIVSAT GVHWEEAGRD YWAFSSDMCS SAIALQALVR LDPQNQIIPN AVRWLMVARR
GDAWLSTQES TWALLALTDW MALTGELSGD YDYAVWLNGN ERIAGRIDAT NVMSPTVVRI
PTTDLLTGDP SLVAVGRSEG PGRLYYAAHL NLALPADQVQ ALDRGIAVTR RYVAADCTDG
PRCPTLTSVK AGDTVRVELS IVAERDLSYV QVTDPLPAGG EAIDPTLATT AIATHVGPTL
QPAPDATTPY FWWWWRWYDR IELRDEKVAL FADYLPRGAY LFSYTFRAVQ PGEYRVIPTI
AQESFFPEVF GRSDGQLFTI TR
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