| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_2175 |
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| Symbol | |
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| ID | 5209138 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 2675830 |
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| End bp | 2677704 |
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| Gene Length | 1875 bp |
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| Protein Length | 624 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640595777 |
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| Product | N-acetylmuramoyl-L-alanine amidase |
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| Protein accession | YP_001276505 |
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| Protein GI | 148656300 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG3023] Negative regulator of beta-lactamase expression |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCCAA TGATCGGACG CTGCCTGACG ATTCCACAAT GGCTCGACTA TGTCGCCCGC
TATCAGTTCG GGCAGTTGAC TCCATCGAAG GTGGTGCTCC ACCACACCTG GCGCCCGACG
GTGCAACAGT GGCGCGGGCT TGCGTCTATG CAGGGCATGC AACGCTACTA TGCTGGCAAG
GGATGGACTT CCGCGCCCCA CATTTATGTT GCCCCCGACG GAATCTGGCT GTTTACGCCG
ATGAAAGACA TCGGCATCCA TGCCGGTCCC GGCAATGGCA GCCTGAAAGC AGGATGGTAC
TCGATCGGCG TCGAAATGGT TGGCGACTAC GACCGTGAGC GACCGTCCGG CGCGGTATGG
GATGGAACGA AAGCAGTACT CGGCGGGCTT TCACGTCGTC TGGGGATCGC CCCCGCGACA
CTGATCGCTT TCCACCGCGA CTACAGCAAG AAGAGTTGTC CGGGATGGGC CGTCACCAAA
GAATGGGTGA TCGGCGAGGT CAACGCCTGG CTGAACAATG TCGCGCCGCC GCCCCCTCCG
CCACCTGGTC CGATCGGTCC GATCCCGCCT GATGTCGAAG AACTCGCCGA GGCGTTGCTC
GACCAGAGTT ACGCCCGTCG CGGTGAGGGG TACAACAGCA GTTGGGCGTT TCATCAGTTT
GCGGTTGAGA ACAATCTGGG CTTCCCAACC GCCAAAAGTC AGCGGTTGAC GCACGGCGGG
AAGACGTACA ATTACCAGCC GTTCGCGCGG GATACGCTCT TCTGTGAAGT GCCGAACTGG
GGTGAGGTGC AACGACTCTC ACAATTGCTC GCCGGTTCCA TTCCGCCTCC CGGAACCCTC
GGGCGTGCAT TGCTCGATGC GACCTACGCG ACTGGCGGTT CGCCGTTTCG CCCCGATTGG
GCATTTCACC AGTACGCGAT TGCCGGTCAA ACGCTAGGTC CGCCGCTGGA ACCGAGCAAA
ACACTGGTTG TGGATGGGGT TTCCTACAGT TACCAGGTCT TCGCCACCGA TACGATTTTC
AACCGCGGCA CAGAATGGCA AAACATTCAG CGTCTCAGCG CCCTTGCCAA CACCACAAAC
CCGACGCAGG CGAAGGTGCG CGATGCGCTG CTCAACGCCA CCTACGCCGC TGCAGGACAG
CAGTACCGTC CCGATTGGGC GTTCCATCAA CTGGCGCGTA CATGGAACCT GGGTGCACCG
CTCGGCAAAA CCGATCCGAT CACGGTTGGC GGCAAGCAGT ACAACGTTCA GGTGTACGCT
ACCGATACGC TCTACAACAT CGTGCCGAAC TGGAGCGACG TGAAACGCCT CAGCGCCATT
TTCAGTCCGC AGCAGACGCT GCTTGCTGCG CCGACGCCGG TTGCGGCGCT CCTTTCGCCC
GGCGCGGTTC TCGCGCCGGA GTGGGACACA TTCTACATCC GGCGGTTTAC AGTCGCCGGG
CGCGCGCCGA GCGCGTATGG CAGTCGCAGC GGCTCGAAGA TCCGCCTGAT CGTGCTGCAT
GGCGATGAAG GACCGGCGCT CCGGTCGCTT GAACAGATGG CGATGCCCGG CGCAGCCTCG
ATGACGCACT ACTATGTCGC CGCCGACGGC GCGATCTATC AGTTGCTCGA TGATGAGTTT
GCCGCGTTTC ACAGCGGTAT CGCGTACTGG AATGGCGCGC GCCGCAACAT CAATCGCAGC
AGTATTGGCA TTGCCCTCGA GCGCCCGAAC CATGGGTATA CCGACGCATC ACGCCGCGCT
CTGGCGTGGC TGATCGCTCG TCTGCGCGCA CGGTACGACA TCCCGCCATC CGGCGTTGTT
CGTTGGGGAG ATATGGCGCC GTCTGCGGCG AACGATCTCG CCGATCTTCC CAGGGATTGG
TATCGAGGGG ATTGA
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| Protein sequence | MPPMIGRCLT IPQWLDYVAR YQFGQLTPSK VVLHHTWRPT VQQWRGLASM QGMQRYYAGK
GWTSAPHIYV APDGIWLFTP MKDIGIHAGP GNGSLKAGWY SIGVEMVGDY DRERPSGAVW
DGTKAVLGGL SRRLGIAPAT LIAFHRDYSK KSCPGWAVTK EWVIGEVNAW LNNVAPPPPP
PPGPIGPIPP DVEELAEALL DQSYARRGEG YNSSWAFHQF AVENNLGFPT AKSQRLTHGG
KTYNYQPFAR DTLFCEVPNW GEVQRLSQLL AGSIPPPGTL GRALLDATYA TGGSPFRPDW
AFHQYAIAGQ TLGPPLEPSK TLVVDGVSYS YQVFATDTIF NRGTEWQNIQ RLSALANTTN
PTQAKVRDAL LNATYAAAGQ QYRPDWAFHQ LARTWNLGAP LGKTDPITVG GKQYNVQVYA
TDTLYNIVPN WSDVKRLSAI FSPQQTLLAA PTPVAALLSP GAVLAPEWDT FYIRRFTVAG
RAPSAYGSRS GSKIRLIVLH GDEGPALRSL EQMAMPGAAS MTHYYVAADG AIYQLLDDEF
AAFHSGIAYW NGARRNINRS SIGIALERPN HGYTDASRRA LAWLIARLRA RYDIPPSGVV
RWGDMAPSAA NDLADLPRDW YRGD
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