| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_2162 |
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| Symbol | |
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| ID | 5209124 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 2660556 |
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| End bp | 2663609 |
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| Gene Length | 3054 bp |
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| Protein Length | 1017 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640595763 |
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| Product | protein serine phosphatase with GAF(s) sensor(s) |
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| Protein accession | YP_001276492 |
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| Protein GI | 148656287 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.266871 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAATCGTG AGCGGCAGCT CATTCTTTAC TGTCTGGTCG TGGGCGTAGC TGGCTGGACT
GCGCTCATCC TCAGCAACCC TGGTGTTGCG TCCTGGGGTG TACTTGCGTT GTTCGTCGTT
CTGGCATTGC TGATCGAAGC AGCAGCATTT CGGGTTCCGC CAGCCGATCC ACACAGTCTG
ACCGGCATCG TCATTCTGGC TGCGGCGCTG GCGCTTGGTC CTGCTGACGG GGCGCTGGTC
GCTGCGGTGG CAGGTTTGAT CTTCGGCGTG TTGCTGCCGT TGATCTATCG CCGTCCACGC
ACCTTCTACC TGCTGGCGGC GCGTCCGCTC CTGCGCAGCG GCGTGCGCGC TGGCGCGGTT
CTAGCAGGCG GAGCGCTGGC GTGGCTCCTT GCCGATGATA CACCCGGCGA GGCGCTGTCG
CTCATGGCGC TGATCCTGTG CTATCCAACG CTCATTCAAC TGAATCGCGC CGTCCGTGAA
TACATTCAGG GCGGCTCGAC CGGCGTCCTG ACATGGTGGC AGTCATCCTG GATGCCCGTC
CTGGCGGCGG AAATTGCGCC GTTGCCGCTG GCGGCGCTCT TCGCCGCCAT TTACACCCGC
CTGGGGATCG GCTACTTCGT GTTTGCAGCA GCCGGGTTGT TTGCTGCCAG CATTGCCGTG
CGCCAGGCGG CGATGAACCT GCGCAACCAG GGCGCTTCCA TCCGTGAGTT GGGGTTGCTG
AACGAAGCCA GTCGCGAGAT TATCCGCGCT GAACTCGATG TCGATGCGCT GAGCGAATTG
ATCTACCGCG CCGCCAGCAA AGTCGTCGAT ACGTCTTCGT TTCACCTGGG GCTGTTCGAT
CCGGAGAGCG ACCGTTATAC GCTGGTCGTG CGTGTGCAGG ATCGGGTGCG CCTGCCGCCG
CTCACGGTCG ATCTGCCGAG CGGCGATGGG CTGGTCGGCT GGATGCGCCA GACCGGGCGC
TCGTTGCTGG TGGAGGACTT CGCCACTGAG ATGGATCGCT TGCCGGCACG TCCACGCTAT
CAGAGTGAAC GACCGCCGCG CTCCGGCATC TATGTGCCGT TGCTCGATGG CGGCAGGGTG
ATCGGGACGA TCTCGATCCA GAGTTACCAG CCCTACGCTT TCGATGCCGA TGATCTGCGC
ATGCTGTCGC TGCTGGCGGA TCAGGCGGCA GTCGCAATTT CAAAGGCGCG CGCCTTTGCC
GCCGCCAACG AACGTGCGGT GCAACTCCAG GCGATCCAGG ACGTCAGTGA GCGCATCACT
GCGATCCTCG AACTGGACCA ACTCCTCTCT TCCGTCGTTC GCCTGATCCG TGAGCGCTTC
GGATACCATA CGGTTCACAT TTTCCTTATC GGTGAAGATG GACGGCTGCA CTTCGGCGCC
AGCACCGTTG AGGGACAGTC GCTCGAACGC CTGCGGCGGA TGGTGCTGCA ACCGGGCGAG
GGCATCGTTG GCAGTGTGGC GTTGACCGGT CAACCGGCTC TGGTGAATGA TGTGCGCACC
GATCCACGTT ACATCAGCGA CGACTCAAGC ACCCGCGCTG AACTTGCGGT ACCGCTGCGC
TATGCCGAAA AGGTCATCGG CGTGCTCGAT ATTCAAAGCG CCGAGGCGGG GCGCTTCCAG
CGCAGCGACC TGTTCGTCAC CCGAACGCTG GCGGATCAGG TGGCGGTTGC GGTGGAGCGT
GCGCGCGCAT TCCAGGCGCA GCGCGAAGAA GCCTGGACAC TGAATGCGCT GTTGCAGGTT
GCCGAAAACC TGTCACGCGC AACATCGCTC GATGTGCTGC TGCCAGCAGT GGTGCGCCTG
CCGCCGCTGC TCCTCGGATG CGTCCGCTGT ACCTGCCTGA TCTGGGACCG ACAGGCGGCT
TCGTTTACGC CACTTGCCGC GTATGGCTTG AGTCCTGCCG ATCGCGCGAC ATTCGTCGGA
TGCCCGATTG CCGAACGGGA TGCACCGCTG CTGGCGGAAG TGGTGCGCAC GGTTGCGCCG
CTGGCGCTCG ACTCTGCCAG GGGGCACGGG CATCTCTGCG CGCCGATTAT CGAACGTTTC
GGCAGTGCGT CGCTGCTGGC AACGCCGCTC TGGACGCGCG GCGCTGCCCT GGGAGTGCTG
GTGATCGACT ATGGACCGGC AGAACACCGT TTCACCGCGC GCGACCTGAT CCTGGCAAAT
GGGTTTGCCT CACAGATCGC CGGAGCGCTC GAAAGCGCAC TGCTGGCGCA GGAGGCAGCA
CAGGCGGCGC GGCTGGAAGA AGAACTGCGC GTTGCCCGCG ATATTCAGCG CACCCTGCTG
CCGTCGCGCG CGCCCAACCT GCCCGGCTGG GAAACGGCTG CCGACTGGCG CTCGGCGCGC
ATGGTCGGCG GAGATTTTTT CGATTACTGG TACCTTCCGC CTCCACAAGA ACCATACGAT
GGCGGTGGTC GATCCGGCAT CCGCACCACA CCGGACCATA ACGGCGCCGT CTGTCAACCG
CTCGGTTTTG TGATTGCTGA TGTCAGTGAT AAAGGCGTGC CGGCGGCGTT GTTCATGGCA
CTGGCGCGCA GTCTGGTGCG CGCCGCAGCG CTCGACGGAT CGTCGCCTGC GGCGGCGCTT
ACCCGCGCCA ATCGCTGGAT TACGCGCGAC ACCGAAGCTG GCATGTTTGT GACCGTTTTC
TACGGCGTGC TCGAACCGCA CACCGGACGC CTGCGCTACT GTTGCGCCGG GCACAACCCG
CCGCTGCTGT TCCGCGCCGA CGGCGGCGTC ATCCCCTTGC AGACGCCGGG GATTGCGCTT
GGCGTGCTCG AAGAAGTTGC ATTGACTGAA GACGATGTGT CGATGAGCGA TGGCGACGTG
CTGGTATGCT ATACCGATGG CGTCACTGAA GCGATCAATG CCGCCGAAGA ACCTTTCGGC
GTCGAACGAC TGATTGAGAA GGTCGCCGCC GTGCGCACCG GCAGCGCTGC CGCCATCCTT
GACGCCATTA ACGACGCCCT CGGTCGCCAC GCCGAGGGAG CGCTCTACGA CGATGTCACC
CTGGTCATCA TCAAACGTGT GGCGGCGCCG TTGAGTGTTG ACACGATGCC CTGA
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| Protein sequence | MNRERQLILY CLVVGVAGWT ALILSNPGVA SWGVLALFVV LALLIEAAAF RVPPADPHSL
TGIVILAAAL ALGPADGALV AAVAGLIFGV LLPLIYRRPR TFYLLAARPL LRSGVRAGAV
LAGGALAWLL ADDTPGEALS LMALILCYPT LIQLNRAVRE YIQGGSTGVL TWWQSSWMPV
LAAEIAPLPL AALFAAIYTR LGIGYFVFAA AGLFAASIAV RQAAMNLRNQ GASIRELGLL
NEASREIIRA ELDVDALSEL IYRAASKVVD TSSFHLGLFD PESDRYTLVV RVQDRVRLPP
LTVDLPSGDG LVGWMRQTGR SLLVEDFATE MDRLPARPRY QSERPPRSGI YVPLLDGGRV
IGTISIQSYQ PYAFDADDLR MLSLLADQAA VAISKARAFA AANERAVQLQ AIQDVSERIT
AILELDQLLS SVVRLIRERF GYHTVHIFLI GEDGRLHFGA STVEGQSLER LRRMVLQPGE
GIVGSVALTG QPALVNDVRT DPRYISDDSS TRAELAVPLR YAEKVIGVLD IQSAEAGRFQ
RSDLFVTRTL ADQVAVAVER ARAFQAQREE AWTLNALLQV AENLSRATSL DVLLPAVVRL
PPLLLGCVRC TCLIWDRQAA SFTPLAAYGL SPADRATFVG CPIAERDAPL LAEVVRTVAP
LALDSARGHG HLCAPIIERF GSASLLATPL WTRGAALGVL VIDYGPAEHR FTARDLILAN
GFASQIAGAL ESALLAQEAA QAARLEEELR VARDIQRTLL PSRAPNLPGW ETAADWRSAR
MVGGDFFDYW YLPPPQEPYD GGGRSGIRTT PDHNGAVCQP LGFVIADVSD KGVPAALFMA
LARSLVRAAA LDGSSPAAAL TRANRWITRD TEAGMFVTVF YGVLEPHTGR LRYCCAGHNP
PLLFRADGGV IPLQTPGIAL GVLEEVALTE DDVSMSDGDV LVCYTDGVTE AINAAEEPFG
VERLIEKVAA VRTGSAAAIL DAINDALGRH AEGALYDDVT LVIIKRVAAP LSVDTMP
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