Gene RoseRS_2158 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_2158 
Symbol 
ID5209120 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp2655897 
End bp2657216 
Gene Length1320 bp 
Protein Length439 aa 
Translation table11 
GC content61% 
IMG OID640595759 
Producthypothetical protein 
Protein accessionYP_001276488 
Protein GI148656283 
COG category[S] Function unknown 
COG ID[COG4102] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGTTT CACGACGTAC CTTCATCGTT GGGTGCAGCG CTGCGATTGC AGCAATGACC 
GGTGGCGCGG TTCGCGGGCT TGCGTTTGCC CAACCCGGCG ATACCACCCG CCGCGATATT
CTGGTTGTGG TGTTCCTGCG CGGCGGTTGC GACGGTCTGA GCCTCGTCGC GCCGGTGAAT
GACCCATTCT ACAAGGGAGC GCGCGGCGAA CTGCGGGTCG AAGAAAGCGG GCAGAACGCC
GGACTGTTGC TAAGCAACAC CATTCCTGGC GCAGATTTTC GCCTGCACCC GCGTGCCACG
CTGCTTCAGT CGCTGTACAT CAACCGCTCA CTGGCAATTG TCCACGCATG TGGTCTGAGA
AATGGCACAC GCAGCCACTT TGAAGCGATG GACTACATGG AAGGCGGGAT TCCAGAGAGT
GGCGTACCGG CGAATGGCTG GCTTGCCCGC TATCTGAACA GTATCAGCGC CAGTGGCTAT
CTTCCGGCAG TTGCAGCCGG AACACGCGTG CCGTTCTCGA TGGTCGGCTT CAACGGCGCT
GCTGCGCTGA CCGATCCGGC TTCATTTAGC CTGAGCTGGA ACTCGTGGCG TTATCGCTCA
CAACTCAACC AGGCGCTCGA TGCGTTCTAC TCTGGCGATT CGCCCGTCCA GCAGGCGGGC
CGCACCACGC TGACGACGAT TGCCAGGATC AACGAGCGTC TGCCGCGTGA CTCGCAGGGC
AGGGTCATTC CCTACACGCC GGAGATAGGG GTCAGATATC CGGGCGGGCG CGGCGCCAGT
CTCGGCAATG CCCTGCGCAC GGTCGCAAGC CTGATCAAAA TGGATGTCGG TCTGCTTGCT
GCAACGGTCG ATTATGGCGG GTGGGATACG CACGAAGGGC AGGGATGGAT TTTTCCCGAA
CTGGTTGCAG GGCTTGCAGA AGGGTTGTAC GCATTCTACA ACGATCTCTG GCGGTACCAT
GATCGGTTGA CGGTGGTGGT TATGAGCGAA TTCGGGCGGC GGCTCAAGTC CAACCGCAGT
GGCGGCACCG ATCACGGGCA CGGCAATGTC ATGCTCGTGC TTGGCGAGGG GATCCGCGGC
GGGAAGATGT ACGGCGTCTG GCCCGGACTG GCGACCGAGC AACTCGATAA TGGCGTGGAT
CTGGCGATCA CCACCGATTA TCGCACAGTG CTGGCAGAGG TCCTGATCAA GCGCGGTGCG
CTTCAGACGG TCGATCAGGT CTTTCCCGGC TTTCGCGGAT CACCGCTCGG ACTCGCCTAC
TCCCCCGGCG AAACGATCGA ACGTCCAAAC CGGGTGAACC TGCCGCTCGT GATCCGCTGA
 
Protein sequence
MTVSRRTFIV GCSAAIAAMT GGAVRGLAFA QPGDTTRRDI LVVVFLRGGC DGLSLVAPVN 
DPFYKGARGE LRVEESGQNA GLLLSNTIPG ADFRLHPRAT LLQSLYINRS LAIVHACGLR
NGTRSHFEAM DYMEGGIPES GVPANGWLAR YLNSISASGY LPAVAAGTRV PFSMVGFNGA
AALTDPASFS LSWNSWRYRS QLNQALDAFY SGDSPVQQAG RTTLTTIARI NERLPRDSQG
RVIPYTPEIG VRYPGGRGAS LGNALRTVAS LIKMDVGLLA ATVDYGGWDT HEGQGWIFPE
LVAGLAEGLY AFYNDLWRYH DRLTVVVMSE FGRRLKSNRS GGTDHGHGNV MLVLGEGIRG
GKMYGVWPGL ATEQLDNGVD LAITTDYRTV LAEVLIKRGA LQTVDQVFPG FRGSPLGLAY
SPGETIERPN RVNLPLVIR