Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_2158 |
Symbol | |
ID | 5209120 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 2655897 |
End bp | 2657216 |
Gene Length | 1320 bp |
Protein Length | 439 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640595759 |
Product | hypothetical protein |
Protein accession | YP_001276488 |
Protein GI | 148656283 |
COG category | [S] Function unknown |
COG ID | [COG4102] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACTGTTT CACGACGTAC CTTCATCGTT GGGTGCAGCG CTGCGATTGC AGCAATGACC GGTGGCGCGG TTCGCGGGCT TGCGTTTGCC CAACCCGGCG ATACCACCCG CCGCGATATT CTGGTTGTGG TGTTCCTGCG CGGCGGTTGC GACGGTCTGA GCCTCGTCGC GCCGGTGAAT GACCCATTCT ACAAGGGAGC GCGCGGCGAA CTGCGGGTCG AAGAAAGCGG GCAGAACGCC GGACTGTTGC TAAGCAACAC CATTCCTGGC GCAGATTTTC GCCTGCACCC GCGTGCCACG CTGCTTCAGT CGCTGTACAT CAACCGCTCA CTGGCAATTG TCCACGCATG TGGTCTGAGA AATGGCACAC GCAGCCACTT TGAAGCGATG GACTACATGG AAGGCGGGAT TCCAGAGAGT GGCGTACCGG CGAATGGCTG GCTTGCCCGC TATCTGAACA GTATCAGCGC CAGTGGCTAT CTTCCGGCAG TTGCAGCCGG AACACGCGTG CCGTTCTCGA TGGTCGGCTT CAACGGCGCT GCTGCGCTGA CCGATCCGGC TTCATTTAGC CTGAGCTGGA ACTCGTGGCG TTATCGCTCA CAACTCAACC AGGCGCTCGA TGCGTTCTAC TCTGGCGATT CGCCCGTCCA GCAGGCGGGC CGCACCACGC TGACGACGAT TGCCAGGATC AACGAGCGTC TGCCGCGTGA CTCGCAGGGC AGGGTCATTC CCTACACGCC GGAGATAGGG GTCAGATATC CGGGCGGGCG CGGCGCCAGT CTCGGCAATG CCCTGCGCAC GGTCGCAAGC CTGATCAAAA TGGATGTCGG TCTGCTTGCT GCAACGGTCG ATTATGGCGG GTGGGATACG CACGAAGGGC AGGGATGGAT TTTTCCCGAA CTGGTTGCAG GGCTTGCAGA AGGGTTGTAC GCATTCTACA ACGATCTCTG GCGGTACCAT GATCGGTTGA CGGTGGTGGT TATGAGCGAA TTCGGGCGGC GGCTCAAGTC CAACCGCAGT GGCGGCACCG ATCACGGGCA CGGCAATGTC ATGCTCGTGC TTGGCGAGGG GATCCGCGGC GGGAAGATGT ACGGCGTCTG GCCCGGACTG GCGACCGAGC AACTCGATAA TGGCGTGGAT CTGGCGATCA CCACCGATTA TCGCACAGTG CTGGCAGAGG TCCTGATCAA GCGCGGTGCG CTTCAGACGG TCGATCAGGT CTTTCCCGGC TTTCGCGGAT CACCGCTCGG ACTCGCCTAC TCCCCCGGCG AAACGATCGA ACGTCCAAAC CGGGTGAACC TGCCGCTCGT GATCCGCTGA
|
Protein sequence | MTVSRRTFIV GCSAAIAAMT GGAVRGLAFA QPGDTTRRDI LVVVFLRGGC DGLSLVAPVN DPFYKGARGE LRVEESGQNA GLLLSNTIPG ADFRLHPRAT LLQSLYINRS LAIVHACGLR NGTRSHFEAM DYMEGGIPES GVPANGWLAR YLNSISASGY LPAVAAGTRV PFSMVGFNGA AALTDPASFS LSWNSWRYRS QLNQALDAFY SGDSPVQQAG RTTLTTIARI NERLPRDSQG RVIPYTPEIG VRYPGGRGAS LGNALRTVAS LIKMDVGLLA ATVDYGGWDT HEGQGWIFPE LVAGLAEGLY AFYNDLWRYH DRLTVVVMSE FGRRLKSNRS GGTDHGHGNV MLVLGEGIRG GKMYGVWPGL ATEQLDNGVD LAITTDYRTV LAEVLIKRGA LQTVDQVFPG FRGSPLGLAY SPGETIERPN RVNLPLVIR
|
| |