Gene RoseRS_2157 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_2157 
Symbol 
ID5209119 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp2655403 
End bp2655822 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content58% 
IMG OID640595758 
Producthypothetical protein 
Protein accessionYP_001276487 
Protein GI148656282 
COG category[S] Function unknown 
COG ID[COG0432] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00149] secondary thiamine-phosphate synthase enzyme 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCTCAT ACCGTGAGGA ACTCTGGTTC AACACACCAA CCCGGGTTGC ATTCGTGCGC 
ATTACCGATC AGGTCGCTGC CGCAGTGCGC AAATCGGGGG TGCGCGAAGG ATTGTGTCTG
GTGAATGCCA TGCACATTAC TGCCAGCGTC TTCGTGAACG ACAATGAATC GGGTTTGTGG
CACGACTTCG AGCGCTGGCT GGAAAAACTC GCGCCGCACG CACCGGTGTC GCAGTATCGC
CACAACGATA CCGGCGAGGA CAATGCCGAT GCACATCTGA AGCGCACCAT CATGGGGCGC
GAGGTGGTGC TGGCGATCAC CGACGGCAAA CTCGACCTTG GACCGTGGGA AGAGGTGTTC
TACGGCGAGT TCGACGGTCA ACGGCGCAAG CGCGTGCTGA TCAAAATCAT TGGGGAGTAA
 
Protein sequence
MRSYREELWF NTPTRVAFVR ITDQVAAAVR KSGVREGLCL VNAMHITASV FVNDNESGLW 
HDFERWLEKL APHAPVSQYR HNDTGEDNAD AHLKRTIMGR EVVLAITDGK LDLGPWEEVF
YGEFDGQRRK RVLIKIIGE