Gene RoseRS_2143 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_2143 
Symbol 
ID5209105 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp2636547 
End bp2637473 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content62% 
IMG OID640595745 
Productbeta-lactamase domain-containing protein 
Protein accessionYP_001276474 
Protein GI148656269 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACG ACCGTTATGG ATTGCCGGAG AACATCGCGC TGGTCGATGA TTATCACCTC 
GGACGCCCCC AGGTGGTCGG AACGTACGTG TTGTTGGGGG AGAATCCGGT GATTGTCGAT
CCCGGTCCTG CCAGTGTGCT GCCGAATCTC GAAACCGGAT TGAGACAGAT CGGTCTGGAG
TTCAGCGATC TGCACGGCAT TGTCCTGTCG CATATCCACC TGGACCATGC GGGCGCCACC
GGATCGCTGG TGCGCTATTT TCCGCACCTG AAAGTCTATG TTCATCATCG TGGCGCTCCG
CATCTGATTG CGCCGGATAA GTTGTTACGC AGCGCGACGC GCATCTACGG GGGGCAGATG
GATTATCTGT GGGGCGAGTT CCTGCCGGTT CCGGTGGAGG CGGTTGTGAC CCTCGGCGGC
GGTGAGACTA TCCGCGTCGC CGGTCGAACC CTGCGGGTCT TCGATGCGCC GGGACATGCG
TCTCATCACC TGATCTATCT CGATGAGGCG ACCGGTGCGG CATGGGTGGG CGATACAACC
GGTCTGCGGA TGCCGGGGTA TACCTATGTG CGTCCAGCCA CGCCGCCGCC GGACATTGAT
CTGGAAGCGT GGCGGCGCAC GCTGGATATG CTGCTGGCGC TCAAGCCGCG TATGCTGCTG
CTGACCCATT TTGGTCCGGC GCACGATCCG GAGCGGCACA TTGCCGAAAT GTGGGAACAT
ACGATGCGTT GGGCTGAAAC AGTGCGCGCG GGTCTCGAGC GCGGCGATGA CGAGGCGACT
GCGGCAGCGC AACTTGCGGC GCTTGCCGAT GCCGAGATGG GCGCCGAAGC GAACGAAGCG
GTGCGTCAGC AGTATGCGCA GGCTGGCGCG GTCGAGATGA GCTGGCACGG TCTGGCGCGC
TACTGGCGCA AAAAGATGGA GGCGTGA
 
Protein sequence
MTDDRYGLPE NIALVDDYHL GRPQVVGTYV LLGENPVIVD PGPASVLPNL ETGLRQIGLE 
FSDLHGIVLS HIHLDHAGAT GSLVRYFPHL KVYVHHRGAP HLIAPDKLLR SATRIYGGQM
DYLWGEFLPV PVEAVVTLGG GETIRVAGRT LRVFDAPGHA SHHLIYLDEA TGAAWVGDTT
GLRMPGYTYV RPATPPPDID LEAWRRTLDM LLALKPRMLL LTHFGPAHDP ERHIAEMWEH
TMRWAETVRA GLERGDDEAT AAAQLAALAD AEMGAEANEA VRQQYAQAGA VEMSWHGLAR
YWRKKMEA