| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_2141 |
|---|
| Symbol | |
|---|
| ID | 5209103 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | + |
|---|
| Start bp | 2635685 |
|---|
| End bp | 2636215 |
|---|
| Gene Length | 531 bp |
|---|
| Protein Length | 176 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 640595743 |
|---|
| Product | small GTP-binding protein |
|---|
| Protein accession | YP_001276472 |
|---|
| Protein GI | 148656267 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2229] Predicted GTPase |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCAGACGG TAAAAATGGT CATCAGCGGC GCAGTCAACG CCGGTAAAAC TGAGTTCATC
AAGACGATCA GCGAGATCGA GGTGGTTTCG ACTGAACGTC GCGCGACTGA CGATACCCGC
CTGATTAAGA AGGAAACCAC GGTTGCAATG GACTTTGGTC GCATTGCAAT CGGTGATGAC
CTGGTGTTGC ACCTGTTCGG CACGCCAGGG CAGAAGCGCT TCGATTTCAT GTGGGAGATT
CTGTCGGAAG GAATGCTGGG GCTGGTTATC CTTGTCGATA GCACCCGCCC CGAGACGTTC
CGCGAAACGA ACCGCATCAT CGATTTCTTT ATGTCCTACC GCGAAACCCC CTACGTGGTA
GCAGCCAACA AGCAGGATCG CCCCAATGCA TGGTCGCCGG AAGAGTTGCG CCTGGCGCTG
CGCCTTCCGG CGCATATCAA AGTGTTGCCA TGCATGGCGA CCGATCGCGA GAGCGTCAAG
AATGTGTTGC TCGAACTCCT CGATGTGATC ATGCAGCGGA GCGAGGATTA G
|
|---|
| Protein sequence | MQTVKMVISG AVNAGKTEFI KTISEIEVVS TERRATDDTR LIKKETTVAM DFGRIAIGDD
LVLHLFGTPG QKRFDFMWEI LSEGMLGLVI LVDSTRPETF RETNRIIDFF MSYRETPYVV
AANKQDRPNA WSPEELRLAL RLPAHIKVLP CMATDRESVK NVLLELLDVI MQRSED
|
|---|
| |