| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_2136 |
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| Symbol | mnmA |
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| ID | 5209098 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 2631811 |
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| End bp | 2632932 |
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| Gene Length | 1122 bp |
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| Protein Length | 373 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640595738 |
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| Product | tRNA-specific 2-thiouridylase MnmA |
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| Protein accession | YP_001276467 |
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| Protein GI | 148656262 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain |
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| TIGRFAM ID | [TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAAGA TCATGGTTGC AATGAGCGGC GGCGTCGATA GTTCACTGGC GGCGGCGCTG
CTCCACGAAG CCGGGCATGA TGTCACCGGC GTGACCCTGC ACCTGTGGGA AGGGGACGAT
GACCGCCTGG CGGAGAGTCT CTGCTGCTCA CAGGAAATGA CCGAGAGCGC GCGGCGTGTC
TGCGCGCAAC TCGGCATACC CTACTATGTC TTCAATTACC AGCGTGAGTT TCGGCGCTAT
GTGATCGAGT ATTTCTTGCG CGAATACGCC AGCGGCTTCA CGCCGAACCC GTGCCTGGAG
TGCAACCGCG AGATCAAGTT TCGCGCCCTG CTGGCGCGCG CCCGCACCCT CGGCTTCGAC
TACGTCGCCA CCGGACATTA CGCCCGGATC CGTGCCGATG AGACGCGCCA CAATGGAGAA
GACGCCGGAT TGCCGCCAGC GGAGCGTGCG CAGCGCACCA CCTACCGCCT GTTGCGCGCC
GTTGATCGTG AAAAGGATCA GTCATACATG CTCTACATGC TCGGTCAGGA CGACCTGGCG
CGGCTGATCT TCCCGATTGG CGAGTACACC AAGGCGGAAG TGCGTGCTAT GGCCGCCGCA
CGCGGACTGG CAAGCGCCAA CCGACCGGAG AGCCAGGACA TCTGCTTCGT TCCCGGCGGC
GACTATCGCA ACCTGCTGCG CGAAGAGCGC CCCGATGCGC TGCGCCCCGG ACCGATCCTC
GATCTCGAAG GGCGCGAAGT CGGGCGGCAC CAGGGGCTGC CGCTCTACAC CATCGGGCAG
CGACGCGGTC TCGGGATCGC AACCGGTCAA CCGATGTATG TCACAGCGCT CGATGTTGCA
CGCAACGCCG TGATTGTCGG TCCTGAATCG GCGCTCAGAC GCGAATCGCT GCGCGCCGAA
TGGGTGACGT TCGTCAGCGG CATGTGGCCC GAAGCGCCCT TCGATTGCCT GGCGCAGATA
CGCGCCCATG CCGATGCCGT TCCTGCCCGC GTCATACCTG GAGAGGCAGG AACGGTCGAT
GTGCATTTCT CACGTCCACA GCGCGCCGTC ACGCCAGGGC AGGCGATCGT CTTCTACGAT
GGTGACGTCG TTCTGGGGGG CGGGCGGATC GCGCGTGACT GA
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| Protein sequence | MAKIMVAMSG GVDSSLAAAL LHEAGHDVTG VTLHLWEGDD DRLAESLCCS QEMTESARRV
CAQLGIPYYV FNYQREFRRY VIEYFLREYA SGFTPNPCLE CNREIKFRAL LARARTLGFD
YVATGHYARI RADETRHNGE DAGLPPAERA QRTTYRLLRA VDREKDQSYM LYMLGQDDLA
RLIFPIGEYT KAEVRAMAAA RGLASANRPE SQDICFVPGG DYRNLLREER PDALRPGPIL
DLEGREVGRH QGLPLYTIGQ RRGLGIATGQ PMYVTALDVA RNAVIVGPES ALRRESLRAE
WVTFVSGMWP EAPFDCLAQI RAHADAVPAR VIPGEAGTVD VHFSRPQRAV TPGQAIVFYD
GDVVLGGGRI ARD
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