| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_2134 |
|---|
| Symbol | |
|---|
| ID | 5209096 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | + |
|---|
| Start bp | 2627199 |
|---|
| End bp | 2630273 |
|---|
| Gene Length | 3075 bp |
|---|
| Protein Length | 1024 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640595736 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001276465 |
|---|
| Protein GI | 148656260 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0247] Fe-S oxidoreductase
[COG0277] FAD/FMN-containing dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACTCAC ACAACCTGTC CTTCCTCCAC CGGTTTGGCG AGCGAGTCTC ATTTGATCGC
ATCGAACGCA AACTCTACAG TCACGACATC GCCGCCATTC CCGGTCTCAT CGCCCCACTG
CTGGGCGATG CCATTCCCGA TGCCGTGGTG CAACCACAGA ACGAAGAGGA ACTGGTCGAA
CTGGCGCGCT GGGCGTCTGC GCACCGTATT CCGCTGACGC CGCGCGGCAA GGCGTCCTCC
GGCTACGGCG GCGCCGTGCC GGTCAGGAAA GGAGTGGTCA TCGATTTCTA CCGCATGCGC
AAGGTGCTGC GCATCGATGC GGCGGCGCAG GTCGTCACGG TCGAGCCGGG CATCACCTGG
GAGCAACTCG ACAGGGCGCT GCAACGAGAG GGACTGACCC TGCGTCTCTA TCCCACCAGT
TATCCATCGT CAACGGTGGG TGGATGGCTG GCGCAGGGCG GTGCTGGCAT CGGCAGTTAC
GAGTTCGGCT ACTTCCGCGA AAACGTCGTT GCCGCGCGTC TTGTGCTGCC GTCGGGTGAG
GTGCGCGAAC TGCGCGACGC CGATCTCGAT CTGGTTGCCG ATGCAGAGGG CATTACTGGC
ATGATCAGCC AGGTAACGCT GAGGGTGATG CCGTTGACCG GCGTTCAGAC GCTGGCGCTC
GCGGTGCATG ACACCCGCGC GTTTCAGGCG TTGCTGGAGG CGTTGATCAC CCGCAGGCTG
CCGATCTGGT CGATGAGTTT CATCAACCCG AAGATGGCGG AGATGAAGAA CGAAGCGCCG
CTGCGCGAAC ATCATGGTCA TGTCGTCGAG CATCGCATTG TTCTGCCAAA AGCGTACATT
CTGACCCTTG CCTTCCGTGA TGCCGATGCT GCTGCGGTGC AGACCGCCAT TCCAGTACTG
GCGGCATCAT ACGGCGCTGA GATCCTGAGC GACGAGATCG CCCGGCACGA GTGGGACGGG
CGGTTCAAAC TGATGACGAT CAAGCGTCTT GGTCCGTCGC TGGTTCCGGC GGAAGTGATT
GTGCCGCTTG ATCGTCTGGC GGATACACTC GATGAATACA GCCGCAGCGT TGCGCAACCA
CTGGTGAAAG AAGGCGTGCT GGTGCGGCAT GGCGTCGATG GCAAGCCGGA AGTCGTCATT
CTCGGCTTCA TCCCTGCCGA TCAGCGCACC TTCCGCTACA ACCTGGTCTT TGGGTTGGCG
CTCACCGTCA TGCAGATCGC GCTCAGGCAT GGTGGACGCC CATATGCGAC TGGCATCTAC
TTCGCCCGCA AAGCGGAACA GGTGTTGGGC AGAGAACGCG CCGCAAGGTT GAAAGCCTTC
AAATCGCAGG TCGATCCGGC AGGCGTCATG AATCCGGGAA AGGTCTTCGG CGGCGGTCTG
GTCAGTGCGT TCATCGATCT GGCATCGCGT TTCGAGCCGC TGGCGCGTCG TTTTGGCAAC
GCCGCCCCGG TTGCAATCGG CGAGCGACCA ACCGCACCGG TGCGCGATAT TCCCGCTGAT
GTCGCCTGGT ACGCCTATGC CTGTTCGCAG TGCGGCTACT GCATCGACGA GTGCGATCAG
TTCTATGGTC GCGGATGGGA GAGCCAGAGT CCGCGCGGCA AGTGGTACTG GCTGCGTGAG
TACATGGAGG GGCGCGAGCA GTGGAATCAG AAAATGGTGG ACACTTTCCT CGCCTGCACG
ACCTGCGAGA TGTGCAACCT GCGCTGCTCC GCCAACCTGC CGATTGAACC GTCGTGGATG
AAACTGCGTG GTCAGTTGAT CAACGAAGAG AAGAAGATGA CCTTCCCGCC GTTCGAGATG
ATGAGTGCGG CTCTTACCGA ACAGGGCAAC ATCTGGGCTG GCTACCGCGA GCGACGCGAC
GCCTGGTTCC CCGAAGACCT GAAAGACCGG CACGGTCCCG ACCATCGCTC GAAGAACGTC
TACTTCGCCG GATGCACCGC CAGTTACGTT GAGCAGGACA TCGGCATCGC CAGTGTGCGC
CTGCTTGATG CCGCAGGCGT CGATTTCACC TATCTGGGAC CGAAGGAACA CTGTTGTGCC
ACGCCGATGC TGGTCGCCGG TCGCTGGGAC CTCTTTGTTG AGACGATGAA GAAGAACATC
GCGGCAGTGA AAGCGGCAGG CGCCGATACG GTGATCAGTT CCTGCCCGGC ATGCGATATG
ATGTGGCGGC ATGTCTACCC GGCGTGGGCG AAGAAGGTTG GCATCGAGTA CAATATCACG
GCGAAGCACT ACTCTGAGAT CGTGGCGGAG AAGATCCATG CCGGTGAGTT TGCGTTCCCG
CAAACGGACA AAGCGCCGGT TACCGTCACC TGGCACGACT CGTGCCACAT CGGGCGGGTA
TCGGGCGTCT ACGAGCCGCC GCGCGATCTG ATCAGAGCCA TTCCAAATGT CAACTTCGTC
GAAATGGCAA ACAACCGCGA CTGTGGGAGA TGCTGCGGTT CGGTGCTGAC CCTGATCAAA
GAGCCGGATG TCGCCGCCGA ACTGGGCAAG GTTCGCATCG ATGAGGCGAT CGAGGCAGGT
GCAGAGAAGG TGCTGGCGCT CTGTCCGTGC TGCGAATTCC AGTTGCGGGT GAGCGCCGAA
AAGAAGCGTT TGCCGGTCGA AGTTGTCGAT CTGGCGCACT TTGCCGCGGA AGCGCTCGGA
TACGAGTTGC CCGATCCCAA TCCGGAGGTG CGTGCGCAGT GGGCGGTGTT CGAGGCGATG
ATCAAACTGA TGACGCCGGA GGGCTTCGCC AATCTGATGA CGACTATGTG GCCCGAGATC
ATCGACGCTA TGCCGTTGGG TATGGGACGG ATGATGCGGG CGATGGGCAG GGTTCCCGGC
GCGCTCGAAG CGATGAAGCC GCTGTTCCCG GCGCTCTTCC CGCGTCTGTT GCCGCTTATG
ATGCCCAAAC TGATGCCGAC CATGCTGGCG CGGGTTGGGG AGATGATCCC GATGCCGGAT
TATATGGCGG AACAAATGCC GGTTCTGATG CCGAAAGTCG TCGACCGGTT GATGCCGCAC
ATGATCGGCG ACGTTGTGCC GCTCGTGACG CAACCGCTGA TCGACTACCT GCACGAACAG
GCGCGGCTGA ACTGA
|
|---|
| Protein sequence | MNSHNLSFLH RFGERVSFDR IERKLYSHDI AAIPGLIAPL LGDAIPDAVV QPQNEEELVE
LARWASAHRI PLTPRGKASS GYGGAVPVRK GVVIDFYRMR KVLRIDAAAQ VVTVEPGITW
EQLDRALQRE GLTLRLYPTS YPSSTVGGWL AQGGAGIGSY EFGYFRENVV AARLVLPSGE
VRELRDADLD LVADAEGITG MISQVTLRVM PLTGVQTLAL AVHDTRAFQA LLEALITRRL
PIWSMSFINP KMAEMKNEAP LREHHGHVVE HRIVLPKAYI LTLAFRDADA AAVQTAIPVL
AASYGAEILS DEIARHEWDG RFKLMTIKRL GPSLVPAEVI VPLDRLADTL DEYSRSVAQP
LVKEGVLVRH GVDGKPEVVI LGFIPADQRT FRYNLVFGLA LTVMQIALRH GGRPYATGIY
FARKAEQVLG RERAARLKAF KSQVDPAGVM NPGKVFGGGL VSAFIDLASR FEPLARRFGN
AAPVAIGERP TAPVRDIPAD VAWYAYACSQ CGYCIDECDQ FYGRGWESQS PRGKWYWLRE
YMEGREQWNQ KMVDTFLACT TCEMCNLRCS ANLPIEPSWM KLRGQLINEE KKMTFPPFEM
MSAALTEQGN IWAGYRERRD AWFPEDLKDR HGPDHRSKNV YFAGCTASYV EQDIGIASVR
LLDAAGVDFT YLGPKEHCCA TPMLVAGRWD LFVETMKKNI AAVKAAGADT VISSCPACDM
MWRHVYPAWA KKVGIEYNIT AKHYSEIVAE KIHAGEFAFP QTDKAPVTVT WHDSCHIGRV
SGVYEPPRDL IRAIPNVNFV EMANNRDCGR CCGSVLTLIK EPDVAAELGK VRIDEAIEAG
AEKVLALCPC CEFQLRVSAE KKRLPVEVVD LAHFAAEALG YELPDPNPEV RAQWAVFEAM
IKLMTPEGFA NLMTTMWPEI IDAMPLGMGR MMRAMGRVPG ALEAMKPLFP ALFPRLLPLM
MPKLMPTMLA RVGEMIPMPD YMAEQMPVLM PKVVDRLMPH MIGDVVPLVT QPLIDYLHEQ
ARLN
|
|---|
| |