Gene RoseRS_2125 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_2125 
Symbol 
ID5209087 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp2617708 
End bp2619114 
Gene Length1407 bp 
Protein Length468 aa 
Translation table11 
GC content64% 
IMG OID640595727 
Productputative transcriptional regulator 
Protein accessionYP_001276456 
Protein GI148656251 
COG category[K] Transcription 
COG ID[COG2865] Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGTTC AGGAACGGGC AATCGCCGAT CTGCTCACGC AACCGGAGGA TCGGCATCTG 
GCGTTCGTGC GGGCGAATAC GCGCCCCGGT GACCTGGCAC AGACGCTGGC GGCAATGGCG
AATGGTTCAG GCGGAACGGT GGTCATCGGT ATGCGCGGGC GACAGGTGGA AGGGGTGGCA
GACGCCGATG CCGCACGCAC GATGGTGCTC GACGCAGCGC TGGCATGCAC GCCGCCGCTG
GTGCTGCCCC TGCCAGCGGT TGTCACCTGT AACGGTGCAA CGCTGCTGGT GGTTACCGTT
CCTTCAGGGC TGCCGCATGT CTACAGCGTC AATGGAACCT ATCTACGACG AGAAGGTCCC
ACGAATGCGC CACTTCCTCC TGATATGCTG CGACACCTTT TGATCGAACG TGGTGAAACC
AGTTGGGATC GGATGACCCC GGCAAACGCG ACCCTCGCCG ATCTCGACCC GGACAAGATC
GCGGCATATG CGCGTCGTGT CGGTCCAATC GCCGAAGCCG ACCCGCTTGC CTTCCTGGTG
CGACGTGGTT GCCTGGTGCA ACGGACCGAT CCGGCGAAGG GGACGCCTGA CCTGATCCCA
ACCAATGCCG GTCTACTTCT CTTTGGCATC GAGGTCGAGC GCTGGTTTCC GCAGGCGGAA
GTGACGCTGG TGCGCTACCA GGGGCGCGAG ATGAGCGATG AGTTCCTGCG TGAAGACATC
CGCGACACGC TGCCCGAGAC GGCGCGCCGC GCCGAGCGCT GGATCGTTGA GCATATGCGG
CGCGGCAGTC GGATGGTCGG GCTGGAACGG GAGGACTGGA CGCAGTTTCC GCTGGGGGCG
GTGCGCGAGG CGCTGATCAA TGCACTGGCG CACCGCGATT ACACCATCCG CGGCGACTCC
ATCCGGATCA TGCTGTTCAG CGACCGTCTG GAATGCTATT CGCCGGGGCG ACTGCCGGGG
CACGTCACAG TGCACAACCT GGTCGACGAG CGCTTCAGTC GCAACGAAAC GCTGGTGCAG
GCGCTGGCGG ACCTGGGGTT GATCGAACGT CTCGGCTATG GTATCGACCG CATGCTGCGC
CAGATGGCGG ACGCCGGGCT GCCGCCGCCG GAGTTCCGCG AAACTGCCGC CGGGTTTATG
GTGACGCTGT ATGGGCATAC CGGAGATGAC CGCGCCGATG CAGGCGGCGC CGATGTCGCC
GCCTGGCGGC GCATGGGGCT CAACGAGCGA CAGATCGCGG CGCTGCTGTT CCTTGCGGCG
CATCAACGCA TTACCAACCG CGACATGCAG GAACTGACGC CTGATGTTTC TGCTGAAACG
TTGCGGCGCG ACCTGGCCGA CCTCGTCGAA CGCGGGTTGC TGCTGCGCGT CGGCGACAAG
CGCGGCGCAT ACTACATTCT CAAATGA
 
Protein sequence
MDVQERAIAD LLTQPEDRHL AFVRANTRPG DLAQTLAAMA NGSGGTVVIG MRGRQVEGVA 
DADAARTMVL DAALACTPPL VLPLPAVVTC NGATLLVVTV PSGLPHVYSV NGTYLRREGP
TNAPLPPDML RHLLIERGET SWDRMTPANA TLADLDPDKI AAYARRVGPI AEADPLAFLV
RRGCLVQRTD PAKGTPDLIP TNAGLLLFGI EVERWFPQAE VTLVRYQGRE MSDEFLREDI
RDTLPETARR AERWIVEHMR RGSRMVGLER EDWTQFPLGA VREALINALA HRDYTIRGDS
IRIMLFSDRL ECYSPGRLPG HVTVHNLVDE RFSRNETLVQ ALADLGLIER LGYGIDRMLR
QMADAGLPPP EFRETAAGFM VTLYGHTGDD RADAGGADVA AWRRMGLNER QIAALLFLAA
HQRITNRDMQ ELTPDVSAET LRRDLADLVE RGLLLRVGDK RGAYYILK