| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_2123 |
|---|
| Symbol | |
|---|
| ID | 5209085 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | - |
|---|
| Start bp | 2616345 |
|---|
| End bp | 2616995 |
|---|
| Gene Length | 651 bp |
|---|
| Protein Length | 216 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640595725 |
|---|
| Product | GDSL family lipase |
|---|
| Protein accession | YP_001276454 |
|---|
| Protein GI | 148656249 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2755] Lysophospholipase L1 and related esterases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCGGGT CGAGATTGGG TATATGGGAG GTGGCATTGG AGTGGTACGA AGATGAGGTT
CGTCAGATTG AACAGTTGCA CGAACAGGCG CCGCCGCAGC CGGGGGCGGT TGTGTTCTAC
GGCAGTTCAT CGCTGCGCCT GTGGACGACG TTGAGCGACG ATATGGCGCC GTGGCCCGTG
GTCAATCGCG CCTTTGGCGG TTCCACGCTT GCAGCATGCG TTCACTTCTT TGATCGACTC
GTCCCGCCGT GCGCACCCCG TGCAATTGTG CTATACGCCG GAGATAACGA TCTTGGCGAT
GGACGAACAC CCGACGATGT GGTGCGGTCG CTGCGCGCCA TGCTCGCCAG GATCGACGCA
TCGCTTGGAC CTATCCCCGT AGCATACATG TCGATCAAGC CAAGCCTGGC GCGCTGGAAT
CTGCGCGAGA GGATAAAACG CGTCAACGCC GAAGCGCGCC TCCTTATGGA GCAGCGTCCT
GCCGGATATT ATGTCGATGT CTATACACCC ATGCTGGGCG CGGATGGACG ACCGCGCGCA
GAACTGTTCG ATGCAGACGG CTTACATCTG AGTTCCGCGG GGTACCGGTT GTGGCGCGAC
GTTCTGCGCC CATATGTCGC CATACTCGCG GGCGCGGAGA AGGATCGATG A
|
|---|
| Protein sequence | MTGSRLGIWE VALEWYEDEV RQIEQLHEQA PPQPGAVVFY GSSSLRLWTT LSDDMAPWPV
VNRAFGGSTL AACVHFFDRL VPPCAPRAIV LYAGDNDLGD GRTPDDVVRS LRAMLARIDA
SLGPIPVAYM SIKPSLARWN LRERIKRVNA EARLLMEQRP AGYYVDVYTP MLGADGRPRA
ELFDADGLHL SSAGYRLWRD VLRPYVAILA GAEKDR
|
|---|
| |