| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_2116 |
|---|
| Symbol | |
|---|
| ID | 5209078 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | + |
|---|
| Start bp | 2608455 |
|---|
| End bp | 2609414 |
|---|
| Gene Length | 960 bp |
|---|
| Protein Length | 319 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640595718 |
|---|
| Product | regulatory protein, MerR |
|---|
| Protein accession | YP_001276447 |
|---|
| Protein GI | 148656242 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG5012] Predicted cobalamin binding protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCAAC CTCCATCGCT TGGGCAGCTG TCGACCGCGC CCGTTTTCAA CACCAAAGCC
GTTGCGCGCG AAACCGGCGT ACCGCCCGAC ACATTTCGCG CCTGGGAGCG GCGCTACGGC
ATTCCGTGCC CGCAGCGCAC GCCGGGTGGT CATCGCCTGT ACTCAGAGCG CGACATCGCC
ATCATCCGCT GGTTGCGCGA CCGCACTGCG GAAGGGGTGA ACATCAGTCA CGCCATCATG
CTGCTCACCA GTGTGACCGA CCAGCCGCCG TCGCATATCG AGATGGATGC GACGCGGGCA
ATTGAGCAGA TGGCGGAGGA ACTCATTACC GCGCTGACAA CATTCGATGC GCAGAACGCC
GAACGGGTGG TTTCCGAGGC ATTCGCGCTG TATCCATTCG AGAAGGTGTT GCTGGAACTC
ATTCAGCCGA CGATGGTCGA AGTCGGTGAG CGCTGGCACC GCGGCGAGAT TAATGTCGCA
GCGGAGCACT TTGCCACCGA GTTCGTGCGG CGCAAGCTGG CAAGCCTGCT GAATGTGTTC
GAGAACCAGG TGCAGCGCGA TACGATTGTT GTGGGGTGCG CTCCGCAGGA ATTGCACGAC
GTGGGGATCA TGTTCGCCAG CCTCTTCCTG GTGCGGCGTG GCTGGCACGT TGTGTACCTG
GGGGCGCAGG TGCCGCTCGC CGACCTGCTC GAAACCATTC GTAAGGTCAA ACCGAAACTC
GTCTGTCTCT CGGCATCAAC GCTCGAAACG GCGATGAATC TGCTCGAAGT GGCGCGGGCG
GTTCGGCGCG AGTTTCCTGA CGTGCATTTC GGGTACGGCG GACGGATCTT CAATGTCAAT
CCGGAACTCT GTGCCGCCAT TCCAGGCGTC TTTCTCGGGC AGGATGCACG TGAACTGGTT
CAAACGGTCA GTGCGCTCAT GTCGAGTAAT GGTACATCCA CCCCCCCTCA ACGTTCGTAG
|
|---|
| Protein sequence | MAQPPSLGQL STAPVFNTKA VARETGVPPD TFRAWERRYG IPCPQRTPGG HRLYSERDIA
IIRWLRDRTA EGVNISHAIM LLTSVTDQPP SHIEMDATRA IEQMAEELIT ALTTFDAQNA
ERVVSEAFAL YPFEKVLLEL IQPTMVEVGE RWHRGEINVA AEHFATEFVR RKLASLLNVF
ENQVQRDTIV VGCAPQELHD VGIMFASLFL VRRGWHVVYL GAQVPLADLL ETIRKVKPKL
VCLSASTLET AMNLLEVARA VRREFPDVHF GYGGRIFNVN PELCAAIPGV FLGQDARELV
QTVSALMSSN GTSTPPQRS
|
|---|
| |