Gene RoseRS_2106 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_2106 
Symbol 
ID5209068 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp2599809 
End bp2600744 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content62% 
IMG OID640595708 
ProductABC transporter related 
Protein accessionYP_001276437 
Protein GI148656232 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCAGA CGTATGCTAT CGAAGCAATC GATCTGAGCC GCGCATTCGG TCCGGTGCGC 
GCCGTTGATC GTCTGAACCT GACCGTCACC GCAGGACGGA TCCACGGGTT GCTCGGACCC
GATGGCGCAG GGAAAACGAC GACGCTGCGG TTGATCTGCG GCGCGCTGCG ACCTGATCAC
GGGCGCGCAA TTGTTGCCGG GATCGACGTG ACCCGTGACC CGGAAGGGGT AAAGCAGCGC
ATCGGGTACA TGCCGCAACG CTTCAGTCTG TACGGCGATC TGACAGTGCT CGAGAATCTG
CGCTTTTATG CCGATGTCTA TGGTGTGCCA CAGGCAGAAC GTCCGGCGCT GCTGAAGCGA
TTGCTCGGGT TCAGTCGCCT GGCGCCGTTT CAGAACCGCC GCACCGATGC ACTTTCTGGC
GGCATGCGAC AGAAACTGGC GCTGGCGTGT GCGTTGATCC ACCGTCCCCA GGTGCTGCTG
CTCGACGAAC CGACCACCGG CGTTGATCCG GTGTCACGGC GCGAGTTCTG GGATATTCTG
CGCGAAGCGG TCTATGCCGA CGGTATGACC GTCCTGTTGA CCACGCCGTA TATGGATGAA
GCGGAACGCT GTCATGAGGT GAGCTTTATG CGCGCGGGCG CGCTGCTGGC GCACGGCGCT
CCGCACGAAT TGCAGCGCCT CGTGCCCGGT GTTGTGCTGG AAGTGCGTGC CGACCCGCGA
CACGCAGCGG AGGCGGTGCT GCGCATACTG CCTGGCATTC GGGATGTGCA CATCTTCGGC
GACCGTCTCC ACGTTATCGC CGAAACCTCA TTCGACGCCG CCGCATTGCG CCAGGCGTTA
GGAGATGCTG GCGTCGCACT GCATACCGTC CATCCCGTCA TGCCTGGTAT GGAGGATGTC
TTTCTGCATT TGCAACGAGA AAGGAAGTCG CAATGA
 
Protein sequence
MNQTYAIEAI DLSRAFGPVR AVDRLNLTVT AGRIHGLLGP DGAGKTTTLR LICGALRPDH 
GRAIVAGIDV TRDPEGVKQR IGYMPQRFSL YGDLTVLENL RFYADVYGVP QAERPALLKR
LLGFSRLAPF QNRRTDALSG GMRQKLALAC ALIHRPQVLL LDEPTTGVDP VSRREFWDIL
REAVYADGMT VLLTTPYMDE AERCHEVSFM RAGALLAHGA PHELQRLVPG VVLEVRADPR
HAAEAVLRIL PGIRDVHIFG DRLHVIAETS FDAAALRQAL GDAGVALHTV HPVMPGMEDV
FLHLQRERKS Q