| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_2090 |
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| Symbol | |
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| ID | 5209052 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 2581364 |
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| End bp | 2582383 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640595693 |
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| Product | helix-turn-helix domain-containing protein |
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| Protein accession | YP_001276422 |
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| Protein GI | 148656217 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.639887 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCAGTTCG CGCCCACGCT GGCATCCGAA CAGCACCTGA CACTCGTGCT GGCTGATGGC
GGCACAGTAG ATATTACTAT CGCAGGACAG GACGCAACCA CACTCGCCAG AATCCCAGAT
CCTGCGCACA GCGGGAATGA ACAACCTCAG TTATCCATCC ACAACAAACC GATAGGAGAG
AGGCCAATCG CATCATCTTC GCTGCACGTC AGGTGCGGTG ATGCGGATCA CGTCGGTGAG
ACGCCAGCCA GATTGCCTCA GATGCCCCTG GTTGAACCGC TCCGCCAGTC GCCCAACCGG
TTTGAGGCAG GGGACCCAAC CGATGCTTTG CCACCACAGA GCAATACATT GATCCCCGGC
ACAGCACGGC TATGGCGAGA AAGCGCTACA TTCGTCGTTA CGCCACGTGC TCCTGGTCGC
GCACTCATCG TTCGACTTCC GGCAGAGGCG CTCATAGCAC GGCTTGGCAG CATCGCAAAT
CTCGACCGAC GACCCCTGTC CTTCGCTCAG GGGAGCGGAG CAATTTGCTT TACTCTGCTG
GTTGTCCTCA TCGCCCAGGC GCCGTTGTTG AGCCAAGAAC AACGCCAGAT CCTGGGCGAT
TGCGCCTTTG ACGCGATTGT TGTATGGCTT CGCAGCGAGC AGACGGTTCG TGTCGGCCTG
TCCGCTCATC GCCGTGAATT ACTCAACGCG ATCTATGCCT ATATCGAACG CTATCTCGAC
GACGATCAAC TCTGTCCGCG CACCATCGCC AGCAGTTTCG GCATTTCAGT CCGCTACCTG
CACTCCCTCT TCACTGCTAC TGGCACAACC GTCGCTCAGT GGATCATGAT CCGCCGCCTG
GAAGCGATCC GCAGCGAGTT GCTGCTACGT GGCGGTGATC GGGGTTGTCT TCGTGACGTT
GCTACACGAT GGGGATTTCA CGATCTCAGC CACTTCAGCC GGGTGTTCCG GCAACATTTT
GGGACGCCGC CATTGACCTA CATCCGCCAG CGCACAGGCA GCCAACGCAC AGAACCATGA
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| Protein sequence | MQFAPTLASE QHLTLVLADG GTVDITIAGQ DATTLARIPD PAHSGNEQPQ LSIHNKPIGE
RPIASSSLHV RCGDADHVGE TPARLPQMPL VEPLRQSPNR FEAGDPTDAL PPQSNTLIPG
TARLWRESAT FVVTPRAPGR ALIVRLPAEA LIARLGSIAN LDRRPLSFAQ GSGAICFTLL
VVLIAQAPLL SQEQRQILGD CAFDAIVVWL RSEQTVRVGL SAHRRELLNA IYAYIERYLD
DDQLCPRTIA SSFGISVRYL HSLFTATGTT VAQWIMIRRL EAIRSELLLR GGDRGCLRDV
ATRWGFHDLS HFSRVFRQHF GTPPLTYIRQ RTGSQRTEP
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