Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_2064 |
Symbol | |
ID | 5209026 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 2555540 |
End bp | 2555953 |
Gene Length | 414 bp |
Protein Length | 137 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640595668 |
Product | hypothetical protein |
Protein accession | YP_001276397 |
Protein GI | 148656192 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00822944 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.000882907 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
| |
Sequence |
Gene sequence | ATGAATATCG ACTTTCTCGA CGCGTATCTC CGGCATTGGG AGGATGCCGA GGTGCTCTTT GGTTCGGAGC GCTGGGCGAA CGCTGACCAT CTCTACGGAC TGGCAGCAGA GTGCGGACTG AAACGTCTCA TGATCGCCTT TGGTATGCCG GTGACAACCG ATGGCGATCC TCAACACCGG AATGATCGCG TTCATGCGGA TCAGGTCTGG ATACGCTACG AAACGTACCG TTCAGGTCAC GGTTCCGGCA GTGGCTACGC CCTGCCATCA CCGAATCCAT TCAATAACTG GCATGTTTCT CAGCGTTATG CCGCGCAGAC GAACTTCACC CAAAGCCACG TTAACGCTCA CCGTATCGGT GCGGACCTTG TTCGCAAACT GATTCAGCAG GCTCAGATAG ATGGTTTGGT ATGA
|
Protein sequence | MNIDFLDAYL RHWEDAEVLF GSERWANADH LYGLAAECGL KRLMIAFGMP VTTDGDPQHR NDRVHADQVW IRYETYRSGH GSGSGYALPS PNPFNNWHVS QRYAAQTNFT QSHVNAHRIG ADLVRKLIQQ AQIDGLV
|
| |