Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_2060 |
Symbol | |
ID | 5209022 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 2551785 |
End bp | 2552870 |
Gene Length | 1086 bp |
Protein Length | 361 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640595664 |
Product | hypothetical protein |
Protein accession | YP_001276393 |
Protein GI | 148656188 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0153049 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAATCGCC ACGACATCCG TTTGCTCCAG GCGGTGCGAC TCTATCCTTC GGTGACGATC ACGTCGCCGA CCCATCGCAC AACACCCGAC AACAAGCAGG ACCCGATTCG CGTGCGGAAT CTGGTGACCG AGGCGACCAA TCGGTTGCTC GCTGAGTTTT CCAGGCGCGA TGTCGAGCCG CTGCTTTCCC GTTTGGAGGC GCTGGTCAAT GATATCGATT ACCGCTACAC CCTCGATGGA CTGGCGCTGT TCGTCAATCG CGATATTGGC CGTCAATTCA TTCTGCCGTT TACGCTGCCG GAGCGTGTTG TGGTTGATGA AACGTTCTGG ACGCGCAGCC TGGTGTTTGC ACTCAATCGC ACGCCACGCT ACTGGGTGCT GGCGCTCAGT GAACAACCGA CGCGCCTGTT TGAGGGGGTG CGTGAGCATC TGCAGGAGAT CACCGGGGAA GGTTTCCCGA TGACACATAC CGGTCCAGGC GGAGAGCGCG GATTGCCGAA TGACCCTGCG ATCAATCGTT CAGCGTACCG TGATGAGCGA CACCGCCAGT TTTTCCGCCA GGTCAGCGCG GCGCTGACGC CCTTCATCAC GGATGACCCG TTGCCGCTGG CGCTGGTCGG CATTGATCGA TATATTGCCT TCTTTCGTGA AGTGTCGCCG CATGCTGGCG CCGTGATAAC GACACTGACC GGCAGTCACG ATAAGACGCC AGCGCAAGAA CTCGGGAAAC TGGTGTGGCC CCTGGTCGAA CAGAACCTGG CTGTCCTCCG CGCCGGGGCG CTGAAGGAAC TCGAAGCAGC AGTCGGTGCG CAGAAGTATG CCTCGACAAT TGGCGAGGTC TGGCGGTTTG CCCACGAAGG GCGCGTAAGC GTGCTCCTCG TTGAAGAAAA CTATCATCAA CCGGCGCGGA TCGCCGCTGA TGGCGTCACA CTGACGCTGG TAGATGACCC GACGCTGCCG GACGTTGTGG ATGATGCAGT GGATGAGATC ATCTCGCTCG TGCTGGAAAA GGGTGGGCGC GTGGTTTTCG TGGATGATGG CGCGTTGCCC CAACACCAGC GTATTGCGGT GATACTCCGA TACTAA
|
Protein sequence | MNRHDIRLLQ AVRLYPSVTI TSPTHRTTPD NKQDPIRVRN LVTEATNRLL AEFSRRDVEP LLSRLEALVN DIDYRYTLDG LALFVNRDIG RQFILPFTLP ERVVVDETFW TRSLVFALNR TPRYWVLALS EQPTRLFEGV REHLQEITGE GFPMTHTGPG GERGLPNDPA INRSAYRDER HRQFFRQVSA ALTPFITDDP LPLALVGIDR YIAFFREVSP HAGAVITTLT GSHDKTPAQE LGKLVWPLVE QNLAVLRAGA LKELEAAVGA QKYASTIGEV WRFAHEGRVS VLLVEENYHQ PARIAADGVT LTLVDDPTLP DVVDDAVDEI ISLVLEKGGR VVFVDDGALP QHQRIAVILR Y
|
| |