Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_2058 |
Symbol | |
ID | 5209020 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 2549553 |
End bp | 2551382 |
Gene Length | 1830 bp |
Protein Length | 609 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640595662 |
Product | citrate transporter |
Protein accession | YP_001276391 |
Protein GI | 148656186 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0471] Di- and tricarboxylate transporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0153049 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCATCG TCTTCGGCAT CCTGACGCTG ACGGTCATCC TGTTTGCCAG TGATCGTCTG CGTCTGGATG TGGTTGCACT GATGGCGGTG CTGCTGCTGC TCCTGACCGG CATTCTGACG CCCGCCGAAG CCCTTGCCGG GTTTTCTGAT CCGATTGTGC TGATTATCGC CGGGTTGTTT ATTGTCGGCG CGGGCCTGTT TCGGACCGGC GTCGCCGATG CGCTGGGGCA GCAACTGGTG CGGCTTGCAG GCACGGGTGA AGCGCGTCTG ATCGTTGCGA TCATGCTGAT CGTCGCCTTT CTCTCAGCAT TCTTGAGCTC GACCGGCACG GTTGCCGTCT TTCTGCCAGT GGTCGTCAGC CTGGCGCAGC GCACGGGCAT CAGCCCGACG AAACTGCTCC TGCCCCTCGC CTATGCTTCG CTGATCGGCG GCATGCTGAC ATTGATCGGT ACGCCGCCCA ACATTGTCGT CAGCAATCAA CTCCAGTCCG CTGGCATGAC GCCCTTCGGC TTCTTTTCGT TCACGCCGGT TGGCGCAGTG ATGCTGATGA TAGGAATCGC GTATATGGCG ACAGTTGGGC GTCGGTTGCT GCCAGAACGC GCCCATCTAT CGGGTGCGTC GCGTGATGGA AAAACACTGA TTGACCCGGC TACCCTGCTG GCGCTGTACG ATCTTCCCGG CAAACTGGCG CGGGTGCAGG TCGAACCAGC CTCGCCGCTG GTCGGGCAGA CGCTGGCGCA GGCGAATCTG CGGGCGCGCT ATCGCGTGAA TGTGGTCGAT GTCGAGCCGC CAGCGTCGCA GGGAATGATC GCCTCGCCAC AGGTTGCACG CTCCGAGATA ACGCTCAAGC CGATGGATGT GCTGCTGGTC AAAGGATCAG CGGACGATGT TGCACGTCTG GCGAAGGATC TGCAGGTGCG CGTGCTTGCG ACCGGCGTCA ACCCGGATGA CCTGATCACC GAAGAAACCG GGATCGTCGA ACTGGTGCTG ACGCCGCGGT CGCGGTTGAT CGGTCACACG TTGCGCGAAG TGCGCTTTCA GGATGCGTAT CAGGTGCTGG TGCTGGCGAT CCTGCGGATG GGTGCGCCGC TCGATGCACC GACGTCGCAG GTGGAACTGC GCTTCGGCGA CACTCTTCTG GTGCAGGGCG ACTGGGAACG GATCGCATCT CTCCTCGATG AACGCAACGA TTTTGTGGTT GTCGGCGAGA TGCGCCGTCC GCCCGTCAGA CGCGCGCTGA CCCGACGCGC TCCGATTGCG CTGGCGATCA TGATCGGCAT GCTGCTCCTC ATTTCATTTG AGGTGATGCC GATGGTCACT GCGGTGCTGC TGGCTGCCGT GGCAATGGTG CTGACCGGCT GCCTGTCGAT GGATGAGGGG TATCGGGCGA TCAACTGGGA GAGTGTGGTG CTGATCGCTG GCATGCTGCC GATGGCGACT GCGCTCGACA AAACAGGCGG TATGAGTCTT GTTGCGAGCG GGTTGACTGC GACTCTCGGC GCGGTGAGTC CGCTGGCGTT GATGGCAGGT CTCTTTATAC TCACGGCGAT CTTTAGCCAG TTCATCTCAA ATACCGCCAC CACGGTGCTG ATGGCGCCGA TTGCATTGCA GGCAGCGATC GAATCTGGCG TATCGCCGTA TCCGCTGCTC ATGGTTGTTG CGCTTGCAGC TTCGACCGCC TTCGCCACCC CGGTGGCATC ACCGGTCAAC ACGCTGGTGC TGGGACCGGG CGATTACCGT TTTACCGATT TCGTGCGAGT AGGGACGCCA CTGCTAGTGG TGATGCTGAT CGCGTCGCTG CTGGTAGTGC CGGTGCTGTT TCCGTTGTAG
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Protein sequence | MIIVFGILTL TVILFASDRL RLDVVALMAV LLLLLTGILT PAEALAGFSD PIVLIIAGLF IVGAGLFRTG VADALGQQLV RLAGTGEARL IVAIMLIVAF LSAFLSSTGT VAVFLPVVVS LAQRTGISPT KLLLPLAYAS LIGGMLTLIG TPPNIVVSNQ LQSAGMTPFG FFSFTPVGAV MLMIGIAYMA TVGRRLLPER AHLSGASRDG KTLIDPATLL ALYDLPGKLA RVQVEPASPL VGQTLAQANL RARYRVNVVD VEPPASQGMI ASPQVARSEI TLKPMDVLLV KGSADDVARL AKDLQVRVLA TGVNPDDLIT EETGIVELVL TPRSRLIGHT LREVRFQDAY QVLVLAILRM GAPLDAPTSQ VELRFGDTLL VQGDWERIAS LLDERNDFVV VGEMRRPPVR RALTRRAPIA LAIMIGMLLL ISFEVMPMVT AVLLAAVAMV LTGCLSMDEG YRAINWESVV LIAGMLPMAT ALDKTGGMSL VASGLTATLG AVSPLALMAG LFILTAIFSQ FISNTATTVL MAPIALQAAI ESGVSPYPLL MVVALAASTA FATPVASPVN TLVLGPGDYR FTDFVRVGTP LLVVMLIASL LVVPVLFPL
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