| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_2029 |
|---|
| Symbol | |
|---|
| ID | 5208991 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | + |
|---|
| Start bp | 2518824 |
|---|
| End bp | 2519525 |
|---|
| Gene Length | 702 bp |
|---|
| Protein Length | 233 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640595635 |
|---|
| Product | uroporphyrin-III C/tetrapyrrole methyltransferase |
|---|
| Protein accession | YP_001276364 |
|---|
| Protein GI | 148656159 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0313] Predicted methyltransferases |
|---|
| TIGRFAM ID | [TIGR00096] probable S-adenosylmethionine-dependent methyltransferase, YraL family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.284005 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGTACA TCGTCGCTAC TCCGATCGGC AACCTGAGCG ATATTTCGTT GCGCGCGCTG
GAAACGCTGC GCGCGGCAGA TGTTATTGCG TGCGAAGATA CGCGCAAGAG CAGCATCCTG
CTTCAGCACT ACGATATTCA TAAACCGCTG GTTTCCTTTC ACGAACACAA CGAACGTCAG
GCGGGCGAAC GCCTGATCGG GTTGCTGCGT CAGGGGAAGA CGGTTGCGCT CATCAGTGAC
GCCGGCACTC CTGGCATCGC CGATCCCGGC TTCACGCTGG TGCGCAGTGC GATTGCCGGG
GGGATCGATG TGACCATGAT TCCGGGACCG ACGGCGCTGA TCATGGCGCT TGTTCTTTCC
GGCTTGCCGC TGCATAGTTT CACGTTCCGC GGCTTTCCGC CACGCAAACC CGGTCCGCGA
CGGCGCTTCC TCGAGGTTGA TCGCGATTCG CCCCATACCC TGATCTTCTA CGAAAGCCCC
TATCGCATTG TGGCGCTCGT GCAGGATGCG CTGGCAGTGT ATGGCGACCG ACCGGCGGCT
CTGGCGAACG ATCTGACCAA GAAGTTCGAG CACGTCGAAC GCGGTACGCT GTCTCACCTG
CTTGGCTATC TTGCAACTGC GCGCGTCCAG GGCGAGTATG TGCTGGTGGT CGCCGGAGCA
GGCGCGCGCC CGGCGTCGAT AGACACGGAT GATCACGAAT GA
|
|---|
| Protein sequence | MLYIVATPIG NLSDISLRAL ETLRAADVIA CEDTRKSSIL LQHYDIHKPL VSFHEHNERQ
AGERLIGLLR QGKTVALISD AGTPGIADPG FTLVRSAIAG GIDVTMIPGP TALIMALVLS
GLPLHSFTFR GFPPRKPGPR RRFLEVDRDS PHTLIFYESP YRIVALVQDA LAVYGDRPAA
LANDLTKKFE HVERGTLSHL LGYLATARVQ GEYVLVVAGA GARPASIDTD DHE
|
|---|
| |