Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_2019 |
Symbol | rpsB |
ID | 5208981 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 2506898 |
End bp | 2507686 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640595626 |
Product | 30S ribosomal protein S2 |
Protein accession | YP_001276355 |
Protein GI | 148656150 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0052] Ribosomal protein S2 |
TIGRFAM ID | [TIGR01011] ribosomal protein S2, bacterial type |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00418742 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGACCCAGG GAGCGCAGCG TCTCGTTTCG ATGCGAGCAC TGCTTGAGTC GGGAGCGCAC TTCGGACACC AGACCAAGCG CTGGAATCCA AAGATGCGGC CGTACATCTT CACGGCGCGC AACGGCATTC ACATCATCGA TCTTCAGAAA ACGATCACCG GTCTCACCGA AGCGTACCAG TTCATCGTTG AAACAGTCGC GGCAGGTCAG AAGGTGCTGT TCGTCGGCAC CAAGAAGCAG GCGCAGGAAA CCATCGCTGA AGAGGCGACG CGCGCGGGGC AGTTCTATGT CACCCAGCGC TGGCTCGGCG GCACACTGAC CAACTTTGCC ACCATGCGCA AGCGGTTGCG CTACCTGAAC GATCTCGAGG ATCAACGCGC ACGGGGTGAG TTCAACAAAC TGACCAAAGC CGAAGCGCTG AAGCTCGACG CGGAGATCGA AAAACTCAAC AAGGTCTTCG GCGGTATGAA GACGATGGAC CGGTTGCCAG GGGCGCTCTT CATCGTCGAC CCGCACAAGG AAGCCCTCGC TGTCAAGGAA GCCAACAAAA CCGGCATTCC AGTCGTGGCG ATGGTCGATA CCAACTGCGA CCCCGACCTG ATTGATTATG TCATTCCGTG CAACGACGAT GCGATCCGCA GCATTCGTCT GATTGCCGCG AAAATCGCCG ACGCCGCCAT CGAAGGTCAG AATCGACGCG AGTCGCTTCA GGCCGACGTG CACGGCGCCG GCTATGAGCA GGAGATGACG GCTCAGTTGA TCGCCAGGGA AGCTGAGGCG GTCGAGTAA
|
Protein sequence | MTQGAQRLVS MRALLESGAH FGHQTKRWNP KMRPYIFTAR NGIHIIDLQK TITGLTEAYQ FIVETVAAGQ KVLFVGTKKQ AQETIAEEAT RAGQFYVTQR WLGGTLTNFA TMRKRLRYLN DLEDQRARGE FNKLTKAEAL KLDAEIEKLN KVFGGMKTMD RLPGALFIVD PHKEALAVKE ANKTGIPVVA MVDTNCDPDL IDYVIPCNDD AIRSIRLIAA KIADAAIEGQ NRRESLQADV HGAGYEQEMT AQLIAREAEA VE
|
| |