Gene RoseRS_2018 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_2018 
Symbol 
ID5208980 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp2506277 
End bp2506807 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content57% 
IMG OID640595625 
Producttranslation elongation factor Ts 
Protein accessionYP_001276354 
Protein GI148656149 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0264] Translation elongation factor Ts 
TIGRFAM ID[TIGR00116] translation elongation factor Ts 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.666479 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00383006 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGGCTGAAA TCACTGCGCA AATGGTGAAG GAACTGCGCG AGCGCACCGG CGCTGGCGTT 
AAGGAGTGCA AGGATATTCT CGAACAAACC AACGGCGACA TCGAGAAGGC TATCGAAGAA
CTGCGCAAGC GCGGGTTGCG CGTGAGCGAT AAAGTCGCCG GTCGTGAAGC GAAAGAAGGA
CGCATCGAAG TGTACATCCA CCACGGCGCG CGCGTCGCGG CAATGGTCGA ACTGAACTGC
GAAACCGACT TCGTTGCCCG CACCGATGAC TTTATCCAGC TGGCGCGCGA TATTGCCATG
CAGGTCGCGG CGATGAATCC ACGCTACCTG CGCCCCGAAG AGGTCCCCGA GAGCGAGATC
GCCGCCAGCG GTCTGTCGCC CGATAAGTTC TATCAGGAAC ATGTCCTGCT GAAGCAGGTG
TTCATCAAAG ACTCGTCGCA GACGATCGAG GAAAAAATCC AGGCGGCGAT AGCCAGAATT
CGTGAGAATA TCGTCGTGCG CCGCTTTGTC CGGTATGAAA TTGGCGGCTA A
 
Protein sequence
MAEITAQMVK ELRERTGAGV KECKDILEQT NGDIEKAIEE LRKRGLRVSD KVAGREAKEG 
RIEVYIHHGA RVAAMVELNC ETDFVARTDD FIQLARDIAM QVAAMNPRYL RPEEVPESEI
AASGLSPDKF YQEHVLLKQV FIKDSSQTIE EKIQAAIARI RENIVVRRFV RYEIGG