Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_2018 |
Symbol | |
ID | 5208980 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 2506277 |
End bp | 2506807 |
Gene Length | 531 bp |
Protein Length | 176 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640595625 |
Product | translation elongation factor Ts |
Protein accession | YP_001276354 |
Protein GI | 148656149 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0264] Translation elongation factor Ts |
TIGRFAM ID | [TIGR00116] translation elongation factor Ts |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.666479 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00383006 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGGCTGAAA TCACTGCGCA AATGGTGAAG GAACTGCGCG AGCGCACCGG CGCTGGCGTT AAGGAGTGCA AGGATATTCT CGAACAAACC AACGGCGACA TCGAGAAGGC TATCGAAGAA CTGCGCAAGC GCGGGTTGCG CGTGAGCGAT AAAGTCGCCG GTCGTGAAGC GAAAGAAGGA CGCATCGAAG TGTACATCCA CCACGGCGCG CGCGTCGCGG CAATGGTCGA ACTGAACTGC GAAACCGACT TCGTTGCCCG CACCGATGAC TTTATCCAGC TGGCGCGCGA TATTGCCATG CAGGTCGCGG CGATGAATCC ACGCTACCTG CGCCCCGAAG AGGTCCCCGA GAGCGAGATC GCCGCCAGCG GTCTGTCGCC CGATAAGTTC TATCAGGAAC ATGTCCTGCT GAAGCAGGTG TTCATCAAAG ACTCGTCGCA GACGATCGAG GAAAAAATCC AGGCGGCGAT AGCCAGAATT CGTGAGAATA TCGTCGTGCG CCGCTTTGTC CGGTATGAAA TTGGCGGCTA A
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Protein sequence | MAEITAQMVK ELRERTGAGV KECKDILEQT NGDIEKAIEE LRKRGLRVSD KVAGREAKEG RIEVYIHHGA RVAAMVELNC ETDFVARTDD FIQLARDIAM QVAAMNPRYL RPEEVPESEI AASGLSPDKF YQEHVLLKQV FIKDSSQTIE EKIQAAIARI RENIVVRRFV RYEIGG
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