Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_2014 |
Symbol | |
ID | 5208976 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 2503128 |
End bp | 2503970 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640595621 |
Product | phosphatidate cytidylyltransferase |
Protein accession | YP_001276350 |
Protein GI | 148656145 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0575] CDP-diglyceride synthetase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.132755 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00415273 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | TTGATCCAGC GTGTGCTGAG TGCGGTGGTT CTGCTGCCGC TCGTGGTTGT CTGTGTGTGG TGGAGCTTCT GGTCCTTCAC CCTGCTGTTG GTTGCTGCTG CTGCTCTCGG CTTGAGTGAA TTGTACGCGG CATTCAGTCG CGGCGGGTAT CAGGCGCAGA CTGCGCCCGG CATGGGTGCA GCCGCCATCT TGATCGGCGT ATCGATCATC AGGGCGCTCA CCGCTCTCGA TCTGACAGCG CCCGCCCTGG CGCTGATCGT GATGGTCAGC CTGGCGATGT TCGCGCCGCG TCATGCGCAG CACGGCGTTG TGGCTGAATG GGCGTTGACG ATCAGCGGTG CGATCTATAT CGGCGGTCTC CTTGGGTTCC TGGTATTGAT GCGGGCGCTG GAAACGCCGC TGCGCGACGG ATTGCTGGCG CCGCTTCAGC CGCAACCCGG CGCGGCCTGG ATTGCGCTGG TGTTGATGAC GACCTGGGGG CAGGATGTGT TCGCATATTT TGTCGGCAAA CGCTGGGGAC GCCGGCGGAT GGCGCCCTCA CTCAGCCCGC GCAAGACGTG GGAGGGCGCG GCTGGCGGCA TGGTCGGCGC GCTTGCTGGC GCATTTGTGG CACTGGCACT GTTCGGGTTG CCGCTCTCGC TCTGGGCGAC GACGTTGATC GGCATCGCGG CGGGGATCGT CGGTCCTATC GGCGATCTCT CCGAGTCGTT CATCAAGCGC CAGGCTGGTT TGAAAGACGC CGGTACGCTG ATCCCCGGTC ACGGCGGCGT CCTGGATCGG ATCGATAGTC TGCTGTTCAC AGCGCCAACG GTGTATATGC TGGCGCTGCT GCTGGCGGGG TGA
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Protein sequence | MIQRVLSAVV LLPLVVVCVW WSFWSFTLLL VAAAALGLSE LYAAFSRGGY QAQTAPGMGA AAILIGVSII RALTALDLTA PALALIVMVS LAMFAPRHAQ HGVVAEWALT ISGAIYIGGL LGFLVLMRAL ETPLRDGLLA PLQPQPGAAW IALVLMTTWG QDVFAYFVGK RWGRRRMAPS LSPRKTWEGA AGGMVGALAG AFVALALFGL PLSLWATTLI GIAAGIVGPI GDLSESFIKR QAGLKDAGTL IPGHGGVLDR IDSLLFTAPT VYMLALLLAG
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