Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_2010 |
Symbol | |
ID | 5208972 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 2498416 |
End bp | 2500002 |
Gene Length | 1587 bp |
Protein Length | 528 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640595617 |
Product | hypothetical protein |
Protein accession | YP_001276346 |
Protein GI | 148656141 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00501978 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCCTGAGA TGCCACGCTC CCATGACCTC AAAGTCGAAC CGCGCGCGCT GGCGCGCTTC ATCCCGCGCA CGGTTCCGCC TGCGTTGCGC CTGCCGCCGG AGATCAACCG CCTCGACCTG CTGCACCAGG AGGGCGTCGA GGCGCTGCTG CGCGAACTCT ACAATCTGCT GCGCGACCAG GGCATCACCT GTGATGTTGA GCCGCCCGCC CCGGCGATGG CGGTGCGCCA GCCGATCCGC ACCATCGACA CGACTCTGAC TGAGAAGCGC GGTACGTGTC TCGACCTCTC GCTCCTCTTC TGCGCCGTCT GCCTGGCGCA CGACCTGGCG CCGCTGCTGA TTGTGCTGGA GGGGCATGCG TTTGTTGCTG TTACGACCGG ACGAACGCTC CAACAACCGC ATGGCGAAGG CATGCCGGCG TTCGAGCGAG GCATGCTCGC CAGTTTCGAC GCACTGCGCG ACCAGGTTCC CCGGCTCTAT CTGCCGGTCG AGTGTACCGG TTTCGCTGCC GGGGCCGGTC TGAGCCGGGA GTATCCCGAA GGGCGCGGGC GCGAACGGCG CGATGGGTGC ATGTCGTTTG ATCGCGCCGT GCGGGCCGGC GAGGAATACC TCAATGCCCA CATCGCGCCC GCCGGCGCGA CCCCCGGCGC AGCGCAGCGC GCCTTCCTGT ACGCGCTCGA TATTGTAACG TTGCAGGATC GGTACGGCTT CATGCCGGTC GGCGACACGC TGCCGGGAGA TACGCGGGTG TACCTGGACT CGGCGCACGC CGAAGGCGGC GCTGCCAGCG TTCGCAATCA GGGAGCGGGC GAAGCGGCGC CGTCCGCGCT GCCTGATGCC GACCGGCTCT ACCAGCGTTC GGCGCATGCC GAAGGCGGCG GTGATGCGCG GGTGGAGAAC CAGGGCGGCA GCGTTGCACC GCCACCGGCA AAGGCACGTC GCATCTACAG CGGTTCGGCG CACGCCGAAG GCGGCGGTAA TGCCACCGTG CTCAACAACG CGCCTCAACC TGTGGCGCGC GTTGAACCGG CGACGGTGCT GGCGGTGTAT GCTGCGCCGC CCGGCAGCGC GCTGCTGCAC TGGGAACGCG ATGTGCGCGC GCTGGGCAAG GCGCTTGCGC CCTACCCCGA CCGCTTCCGT CTCGACGTTG TGCCGCTGGC GACGCCGGAA GACGTGCAGC GCGCGCTGGT GCAGTTTCGC CCGCGCTATC TGCATCTCTT CGCCCATGGC GCAGTTGATG GCATCCTGCT CGATGACGGC GAGGGCGGGC GTGGCTGGAA ACTCCCTTAC CCGCTGCTGG CGGAAATGGT GCGCGCCACG CCTGGCCTCC GCTGCGTCCT GCTCAGCGCC TGCGACTCGG CCTATGCCGC GAGTGCAACC GGCAGCGGCG AGCCGTACCT GATCGCCATG CGTGGCCAGG TCAGCGTCGA TGCCGCGATC GCCTTTGCCG GGGGGTTCTA TGAAGCCCTC GCCGCGCGCG AGGACACTCC GATTGAAGCG GCCTTCGCTC AGGGGCTGAT CCGGCTGAAG CTGATTGCGC CGCTGGATGC GGAGGTTCCG CTGCTGGCGG CGGGCTGGCG CGGGTGA
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Protein sequence | MPEMPRSHDL KVEPRALARF IPRTVPPALR LPPEINRLDL LHQEGVEALL RELYNLLRDQ GITCDVEPPA PAMAVRQPIR TIDTTLTEKR GTCLDLSLLF CAVCLAHDLA PLLIVLEGHA FVAVTTGRTL QQPHGEGMPA FERGMLASFD ALRDQVPRLY LPVECTGFAA GAGLSREYPE GRGRERRDGC MSFDRAVRAG EEYLNAHIAP AGATPGAAQR AFLYALDIVT LQDRYGFMPV GDTLPGDTRV YLDSAHAEGG AASVRNQGAG EAAPSALPDA DRLYQRSAHA EGGGDARVEN QGGSVAPPPA KARRIYSGSA HAEGGGNATV LNNAPQPVAR VEPATVLAVY AAPPGSALLH WERDVRALGK ALAPYPDRFR LDVVPLATPE DVQRALVQFR PRYLHLFAHG AVDGILLDDG EGGRGWKLPY PLLAEMVRAT PGLRCVLLSA CDSAYAASAT GSGEPYLIAM RGQVSVDAAI AFAGGFYEAL AAREDTPIEA AFAQGLIRLK LIAPLDAEVP LLAAGWRG
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