| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_1980 |
|---|
| Symbol | |
|---|
| ID | 5208942 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | + |
|---|
| Start bp | 2460991 |
|---|
| End bp | 2461557 |
|---|
| Gene Length | 567 bp |
|---|
| Protein Length | 188 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640595588 |
|---|
| Product | ATP--cobalamin adenosyltransferase |
|---|
| Protein accession | YP_001276317 |
|---|
| Protein GI | 148656112 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2096] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00636] ATP:cob(I)alamin adenosyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0245257 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.237646 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAGATCT ATACGCGAAC GGGCGACGAG GGCGAAACCG GGTTGTGGGG CGGGTTGCGC
GTCCCCAAGG ATGCGCCCCG CGTTCAGGCA TACGGCACTG TCGATGAGTG CAATGCGGCA
ATCGGCGTCG CGCGCGCGGC AGGCGTCGGC GCAGAACTCG ACGCGCTGCT GGCGCGGGTT
CAGAACGATC TCTTCGTCGT CGGCGCCGAC CTGGCGACGC CTGGGGAGGC GGCGAATATT
CCACGTATCG ACCAGGAGGC GGTGCAGGCG TTGGAGCAGG CAATCGATGA ACTGGAGGCG
CGATTGGAAC CATTGCGCCA GTTCATTCTG CCGGGTGGTT CGTTATCTGC CGCTTACCTT
CATCTGGCGC GCACGATCTG TCGCCGCGCC GAACGGCGGG TTGTGGCGCT GAGCCACAAC
GAACCGGTCA ATCCGCAGGT CGCTGTGTAT CTGAATCGCC TTTCAGACCT GCTGTTCGTT
GCTGCGCGGT TTGCGAATGC GAACGCTGGC GTCCCCGATG TGCCGTGGGA AAGCCCTCGG
ATGCGCGGGA AGGCGGAGGG AGGTTGA
|
|---|
| Protein sequence | MKIYTRTGDE GETGLWGGLR VPKDAPRVQA YGTVDECNAA IGVARAAGVG AELDALLARV
QNDLFVVGAD LATPGEAANI PRIDQEAVQA LEQAIDELEA RLEPLRQFIL PGGSLSAAYL
HLARTICRRA ERRVVALSHN EPVNPQVAVY LNRLSDLLFV AARFANANAG VPDVPWESPR
MRGKAEGG
|
|---|
| |