| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_1979 |
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| Symbol | |
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| ID | 5208941 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 2459206 |
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| End bp | 2460975 |
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| Gene Length | 1770 bp |
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| Protein Length | 589 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640595587 |
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| Product | aspartyl-tRNA synthetase |
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| Protein accession | YP_001276316 |
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| Protein GI | 148656111 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0173] Aspartyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00459] aspartyl-tRNA synthetase, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000243263 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.298313 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTACCGCA GCCACACCTG CGGCGAGTTG CGTGCAGAAC ACATCGGTCA GGAGGTGCTG
CTCGCTGGTT GGGTGCATCG CCGCCGCGAC CACGGTCCGT TGATTTTTAT TGACCTGCGC
GACCGGTATG GTATCACACA GATTGTCTTT GACTCGGCTG ATTCGCCGGT GGCGCATGCT
GTCGCCAGCG ATGCGCGCGT GGAGTACGTG CTTCAAGTGC GCGGCAGGGT GGTGCAGCGC
CCGGAGGAGG CGTACAATCC CGATATTGCC ACCGGTATGA TCGAAGTCCA CGCAACCGAG
GCGACGGTGC TCAACCCGGC AAAAACGCCG CCGCTCTACA TCAATAAGGA AGGTGGTGAA
GAGGAGACGC TTCGCCTGAA ATATCGCTAT CTCGATCTCC GGCGCGAACG GATGCAGCGG
AATATCATGC TGCGCCATCG GATCGTCAAG TTCATCCGCG ATTTCCTCGA CCGCGAGGGG
TTTGTCGAGA TCGAGACGCC GATCCTGATC AAATCGACGC CAGAGGGTGC GCGCGACTAT
CTGGTGCCGA GTCGATTGCA TCCGGGCAAA TTCTATGCGT TGCCGCAGTC GCCGCAGCAG
TTGAAGCAAC TGCTCATGGT CGCCGGATTC GATCGCTACT TCCAGATCGC GCGCTGCTTC
CGCGATGAGG ATCAGCGCGC CGACCGGCAG CCCGAATTCA CGCAACTCGA CATGGAGATG
AGTTTTGTCG ATCAGGGCGA TGTGCTCGAT ATCATTGAGC GTCTGTTCAC TGCGTTGTGT
CGTGAAATTG TACCGCATAA GCGGTTAGTG ACGCCCTTCC CGCGCCTGAC ATACGCCGAG
GCGATGGAGC GTTTTGGGTC GGACAAGCCG GATCTGCGCT ACGGTCTGGA ACTGGTCGAT
GTGAGCGATG TGGTGGCTGC CAGTTCGTTC GGCGTCTTTC GCGCAGCGCT CGATACCGGC
GGGCAGGTGA AGGGATTGCG CATTCCCGGC GCCGGGAGTT ACTCGCGCAA ACAGATCGAC
GAGGTGGTTG AACTGGCGAA GCAGGCGGGC GCCAGAGGAT TGCTGTGGGC GGTTGTGCCA
GGCGAAGGGG GCGAGGTGCG CTCCAGTTTT GGCAGGCAGG TGTCACCCGA TGAAATGGCT
GCCATCATTC GCCGCATGGA AGGCGCACCC GGCGATCTGT TGCTGATCGT TGCAGATCCG
CCGAAGATTG TGGCGCAAAC CCTGGATCGC CTGCGGCGCG AATTTGGTGC ACGCCTTAAC
CTTGCCGATC CGAATGTGCT GGCGTGGGCC TGGGTGATCG ATTTTCCGCT CGTCGAGTGG
AACGAGGAGG AGCAGCGCTG GGATGCAGTG CATCACCCAT TCACAGCGCC AAAGGATGAG
GACCTGCACC TGATGGACAC CGACCCCGGC AGGGTGCGCG CCAAAGCGTA TGACCTGATC
CTGAACGGAT ACGAAGCTGG CGGCGGATCG ATCCGTATCC ATCGCCGTGA TGTGCAGCAA
CGCCTGTTCG ACCTGCTCGG CATCGACCGC GAAACGGCAA TGCGTCAGTT CGGGCATATG
CTGGAAGCGT TCGAGTACGG CGCACCGCCG CACGGCGGCA TTGCCCCCGG CATCGACCGC
ATTTGCATGA TCCTTGCCGA TGAAGTCACG ATCCGCGAGG TGATGGCATT CCCGAAGACG
CAGCAGGCGG TCGATCTGAT GACCAATGCG CCATCACCGG TCGATGAGCG TCAGTTGCGC
GAGTTGCATA TTGCGCTGCG GCTCGACTGA
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| Protein sequence | MYRSHTCGEL RAEHIGQEVL LAGWVHRRRD HGPLIFIDLR DRYGITQIVF DSADSPVAHA
VASDARVEYV LQVRGRVVQR PEEAYNPDIA TGMIEVHATE ATVLNPAKTP PLYINKEGGE
EETLRLKYRY LDLRRERMQR NIMLRHRIVK FIRDFLDREG FVEIETPILI KSTPEGARDY
LVPSRLHPGK FYALPQSPQQ LKQLLMVAGF DRYFQIARCF RDEDQRADRQ PEFTQLDMEM
SFVDQGDVLD IIERLFTALC REIVPHKRLV TPFPRLTYAE AMERFGSDKP DLRYGLELVD
VSDVVAASSF GVFRAALDTG GQVKGLRIPG AGSYSRKQID EVVELAKQAG ARGLLWAVVP
GEGGEVRSSF GRQVSPDEMA AIIRRMEGAP GDLLLIVADP PKIVAQTLDR LRREFGARLN
LADPNVLAWA WVIDFPLVEW NEEEQRWDAV HHPFTAPKDE DLHLMDTDPG RVRAKAYDLI
LNGYEAGGGS IRIHRRDVQQ RLFDLLGIDR ETAMRQFGHM LEAFEYGAPP HGGIAPGIDR
ICMILADEVT IREVMAFPKT QQAVDLMTNA PSPVDERQLR ELHIALRLD
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