| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_1978 |
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| Symbol | |
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| ID | 5208940 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 2458355 |
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| End bp | 2459107 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640595586 |
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| Product | WecB/TagA/CpsF family glycosyl transferase |
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| Protein accession | YP_001276315 |
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| Protein GI | 148656110 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1922] Teichoic acid biosynthesis proteins |
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| TIGRFAM ID | [TIGR00696] bacterial polymer biosynthesis proteins, WecB/TagA/CpsF family |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000239664 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.455092 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCAAGC GTGTCGTCAT TCTTGGCGTC GCTATCGATG ATGTGCTGAT GGATGAAGCC
ATTGCCGCAG TTGCCCGGTT CATTGACGAA GGCGGTCCAC ACCAGATCGT GACGGTCAAT
CCGGAGTTTG TGATGGAAGC GCGACGCAAT CGCGCCTTTC GACGGGTGCT TGCCGCTGCC
GACCTGGCAA CACCCGACGG GTTTGGGATC ATCCTGGCGG CGCGCTGGCG CGGGACGCCG
TTGCGCGGGC GCGTGACCGG CATCGACCTG ACCGAACGCA TTGCTGCTGA GGCGGCGCGA
CGCGGTTGGT CGCTGTTCCT CCTCGGCGCG GCGCCAGGCG TCGCAGAGCG CGCTGCGGCA
GCCCTGCAAC GGGCGAATCC GGGTCTGCGC ATCGCCGGAT GCTACGCTGG CTCGCCGCGC
CCGTCCGACG AACCGCTGAT CCGCGAACGC ATCCTTGCCG CCAGACCCGA CGTGCTCCTG
GTGGCATATG GGCACCCGGC GCAGGATCTG TGGATTGCAC GCAATCAACC GCTCCTGCGT
GTGCCGGTCG CCATCGGCGT CGGGGGAACC TTCGATGAAC TGGCAGGCGT CGTGCCGCGT
GCACCGGCGC TGATGCAACG CCTGGGGTTG AAATGGCTCT ATCGCCTGAT CGTGCAACCC
TGGCGCTGGC GACGGATTAT GACGGCGGCA CCGCTCTTTC TATGGACGGT GCTGCGCGAG
GGGCGCGCCT TCGATGCGCT GCACGCTGAA TAG
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| Protein sequence | MRKRVVILGV AIDDVLMDEA IAAVARFIDE GGPHQIVTVN PEFVMEARRN RAFRRVLAAA
DLATPDGFGI ILAARWRGTP LRGRVTGIDL TERIAAEAAR RGWSLFLLGA APGVAERAAA
ALQRANPGLR IAGCYAGSPR PSDEPLIRER ILAARPDVLL VAYGHPAQDL WIARNQPLLR
VPVAIGVGGT FDELAGVVPR APALMQRLGL KWLYRLIVQP WRWRRIMTAA PLFLWTVLRE
GRAFDALHAE
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