Gene RoseRS_1977 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_1977 
Symbol 
ID5208939 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp2457233 
End bp2458408 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content59% 
IMG OID640595585 
ProductN-acylglucosamine 2-epimerase 
Protein accessionYP_001276314 
Protein GI148656109 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2942] N-acyl-D-glucosamine 2-epimerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0057308 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.460832 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGCAG CATATGCGGA GCGCTATCGC ACGAATCTGG AGTCGGTCAT TTCGTTCTGG 
TTGAACCATT CGCTGGATCG CGAGTACGGC GGACAGTTCA CCTGCCTTGA TCGCGATGGG
ACGGTCTATG ACACGAAGAA GTACATGTGG ATGCAGGGGC GGGCGGTCTG GATGTTTTCG
CGGCTCTACA ACGAGTTCGA GCGGCGTCAG GAGTTTCTCG ATGCGGCAAC GCTCATCTGT
CGGTTCATGC GCCGTTATGG TCGCGATCCG CAGGGGCGCG TCTATTTCAG TCTGACCCGC
GAAGGGGAAC CGTATTTCTA TCAGCGCAAA CCGTATGCCG CTGTGTTCTA CATGTTGGGG
TTGCTCGAAT ATGCCCGCGC AACCGGTGAC GCCAGTTGTT TCGATGAAGC CGTTGAGATC
TTCTGGAAGA TCGATGCGTG GATCCGCAAT CCGGTCTTGC TCGACCGTCC GGTGCTGATC
GGCAACCCGC CGATCAGCAA TCTGGCGAAT GTGATGGTGC TGGCGAGCAT GGCGATCGAA
CTGGCGCGTG TCTCTGATGA TCCGCGCTAC CTCCAGGTCA TCCGCGACGC GATGGATGGC
GTGACCCGCC ACTATGATCC ACAGCGGCGC ATTCTCGTCG AGCATGTCGC ACTCGATGGG
CGCGACCTGC GCGCCTGGCC CGAAGGTCGC CTGTTCAACC CCGGTCATGC GATTGAGGTC
GCCTGGTTTC TGCTCCATAT GCTGGAATTC GTCCCTGACG AGCAGCACCG GCAACTGGCG
CTCGATGCGC TGGAAGGATC GCTGGAGTAT GGTTGGGACC GTGAGTACGG CGGGTTGTAC
TACTTCATGG ATATCGAAGG AAAACCCACG CTGCAACTCG AGTCGACGAT GAAACTCTGG
TGGCCGCATA CCGAGGCGAT CTATGCGCTG GTGCTGGCGT ACACATCGAC CGGCGAGGAA
CGCTGGTTGC GCTGGCTGGA ACGGGTGGAT GAGTACGCCT TCCGCACATT TGTCGATCCG
GTCTATGGCG AGTGGTTCGG TTACTGCGAC CGTCGCGGCG AACCGGTGCT GAGCAGCAAG
GGTGGCAATT ACAAGGGTTT CTTCCATGTG CCGCGTGCGC TACTATTCAG CGTGCAGCGC
ATCGAAGGCG CGCCCCTCGC GCAGCACCGT CCATAG
 
Protein sequence
MLAAYAERYR TNLESVISFW LNHSLDREYG GQFTCLDRDG TVYDTKKYMW MQGRAVWMFS 
RLYNEFERRQ EFLDAATLIC RFMRRYGRDP QGRVYFSLTR EGEPYFYQRK PYAAVFYMLG
LLEYARATGD ASCFDEAVEI FWKIDAWIRN PVLLDRPVLI GNPPISNLAN VMVLASMAIE
LARVSDDPRY LQVIRDAMDG VTRHYDPQRR ILVEHVALDG RDLRAWPEGR LFNPGHAIEV
AWFLLHMLEF VPDEQHRQLA LDALEGSLEY GWDREYGGLY YFMDIEGKPT LQLESTMKLW
WPHTEAIYAL VLAYTSTGEE RWLRWLERVD EYAFRTFVDP VYGEWFGYCD RRGEPVLSSK
GGNYKGFFHV PRALLFSVQR IEGAPLAQHR P