Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_1977 |
Symbol | |
ID | 5208939 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 2457233 |
End bp | 2458408 |
Gene Length | 1176 bp |
Protein Length | 391 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640595585 |
Product | N-acylglucosamine 2-epimerase |
Protein accession | YP_001276314 |
Protein GI | 148656109 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2942] N-acyl-D-glucosamine 2-epimerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0057308 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.460832 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCGCAG CATATGCGGA GCGCTATCGC ACGAATCTGG AGTCGGTCAT TTCGTTCTGG TTGAACCATT CGCTGGATCG CGAGTACGGC GGACAGTTCA CCTGCCTTGA TCGCGATGGG ACGGTCTATG ACACGAAGAA GTACATGTGG ATGCAGGGGC GGGCGGTCTG GATGTTTTCG CGGCTCTACA ACGAGTTCGA GCGGCGTCAG GAGTTTCTCG ATGCGGCAAC GCTCATCTGT CGGTTCATGC GCCGTTATGG TCGCGATCCG CAGGGGCGCG TCTATTTCAG TCTGACCCGC GAAGGGGAAC CGTATTTCTA TCAGCGCAAA CCGTATGCCG CTGTGTTCTA CATGTTGGGG TTGCTCGAAT ATGCCCGCGC AACCGGTGAC GCCAGTTGTT TCGATGAAGC CGTTGAGATC TTCTGGAAGA TCGATGCGTG GATCCGCAAT CCGGTCTTGC TCGACCGTCC GGTGCTGATC GGCAACCCGC CGATCAGCAA TCTGGCGAAT GTGATGGTGC TGGCGAGCAT GGCGATCGAA CTGGCGCGTG TCTCTGATGA TCCGCGCTAC CTCCAGGTCA TCCGCGACGC GATGGATGGC GTGACCCGCC ACTATGATCC ACAGCGGCGC ATTCTCGTCG AGCATGTCGC ACTCGATGGG CGCGACCTGC GCGCCTGGCC CGAAGGTCGC CTGTTCAACC CCGGTCATGC GATTGAGGTC GCCTGGTTTC TGCTCCATAT GCTGGAATTC GTCCCTGACG AGCAGCACCG GCAACTGGCG CTCGATGCGC TGGAAGGATC GCTGGAGTAT GGTTGGGACC GTGAGTACGG CGGGTTGTAC TACTTCATGG ATATCGAAGG AAAACCCACG CTGCAACTCG AGTCGACGAT GAAACTCTGG TGGCCGCATA CCGAGGCGAT CTATGCGCTG GTGCTGGCGT ACACATCGAC CGGCGAGGAA CGCTGGTTGC GCTGGCTGGA ACGGGTGGAT GAGTACGCCT TCCGCACATT TGTCGATCCG GTCTATGGCG AGTGGTTCGG TTACTGCGAC CGTCGCGGCG AACCGGTGCT GAGCAGCAAG GGTGGCAATT ACAAGGGTTT CTTCCATGTG CCGCGTGCGC TACTATTCAG CGTGCAGCGC ATCGAAGGCG CGCCCCTCGC GCAGCACCGT CCATAG
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Protein sequence | MLAAYAERYR TNLESVISFW LNHSLDREYG GQFTCLDRDG TVYDTKKYMW MQGRAVWMFS RLYNEFERRQ EFLDAATLIC RFMRRYGRDP QGRVYFSLTR EGEPYFYQRK PYAAVFYMLG LLEYARATGD ASCFDEAVEI FWKIDAWIRN PVLLDRPVLI GNPPISNLAN VMVLASMAIE LARVSDDPRY LQVIRDAMDG VTRHYDPQRR ILVEHVALDG RDLRAWPEGR LFNPGHAIEV AWFLLHMLEF VPDEQHRQLA LDALEGSLEY GWDREYGGLY YFMDIEGKPT LQLESTMKLW WPHTEAIYAL VLAYTSTGEE RWLRWLERVD EYAFRTFVDP VYGEWFGYCD RRGEPVLSSK GGNYKGFFHV PRALLFSVQR IEGAPLAQHR P
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