| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_1965 |
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| Symbol | |
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| ID | 5208927 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 2445511 |
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| End bp | 2447181 |
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| Gene Length | 1671 bp |
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| Protein Length | 556 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640595573 |
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| Product | 2-isopropylmalate synthase |
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| Protein accession | YP_001276302 |
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| Protein GI | 148656097 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR00973] 2-isopropylmalate synthase, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.130131 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGGATC ATGTACGCAT CTTCGATACC ACCCTGCGCG ATGGTGAACA GGCGCCCGGC
TGCACAATGA CCCTGGAAGA AAAACTGGAG GTAGCGCGGC AACTTGCGCG CCTGGGCGTC
GACATCATCG AAGCCGGCTT CCCGGCAGCG TCCCCCGGCG ACTGGGCGGC AGTCCACGAG
ATCGCCAGAA CCGTCGGAAC GCCGGACGGT CCGATCATCG CAGCCCTGGC GCGCGCCAAT
AAGGACGACA TCGATAAAGC CTGGAGCGCC ATTCAACCCG CCGCGAAGAA ACGTATCCAC
ACCTTTATCT CCTCGTCCGA CATTCACATT GAACATCAGT TGCGTTCGAC CCGCGAAGAA
GTGCTGGAGC GCGCACGCAT GATGGTGCGC TACGCCCGTT CGCTGTGCGA CGATGTCGAG
TTCTCGCCGA TGGACGCGAC CCGCTCCGAC CCGGAGTATG TCTACCGCAT GCTCGCGGCA
GTGGTCGAAG AGGGCGCCAC CACGCTCAAC ATTCCTGATA CCGTCGGTTA CGCCACCCCC
GAAGAGTACG CCGAACTGAT CGCCGGTATC TATCGTCACG TCCCCGGCGC GGAGAAGGTC
ATCATTTCCA CCCACTGCCA CGACGACCTG GGCATGGCGG TGGCGAATTC GCTGGCAGGC
GTGCGCGCTG GCGCGCGTCA GATTGAATGC ACCATCAATG GCATTGGCGA ACGCGCTGGC
AACGCTTCAC TCGAAGAAGT CGTGATGGCG TTGAAAACAC GCCGATCGTT CTTTGGAGTC
GATACACGGA TCAACACCCG CGAACTGGCG CGCAGCAGTC GCCTGGTGAG CACCATTATC
GGCATGCCGG TGCCGCCCAA CAAGGCGATT GTCGGCGCCA ACGCCTTCGC CCACGAGTCC
GGCATTCATC AGGACGGCGT CCTGAAGCAC CGGATGACCT ACGAAATTAT GGACGCAACA
ACCATCGGTC TCGATGGGAA TGCGATTGTG CTCGGCAAAC ATTCGGGACG CAATGCGCTG
CGCACCAAAC TCGCCGCTAT GGGGTATGAG TTCGACAGCG AGGAAGAATT CAACCAGGTC
TTCCAGCGCT TCAAGGAACT GTGCGACAAA AAGAAGGTTG TCGATGATCG CGACCTGGAA
GTGCTGGCAA CCGGCGGTTC GCTCCACACC CCCGACCTCT ACCGCCTGGA CCACGTGCAG
GTTACCTGCG GCACCGGCGT GACACCGGTG GCGACGGTAC GCATCACCGA TCCTGACGGC
AACACGCACA CCACCGCCGC CCACGGCACC GGTCCGGTCG ATGCGATCTA CAAAGCGATC
GACAAAATTG TCGGGCGACC GAATGAACTG ATCGAATTCT CGATCAAGGC GGTGACCGAG
GGGATCGATG CGGTTGCTGA GGTTTCAGTT CGCATTCGCG AACCGGGTAA TGAAGTCCAG
GAGGGCGAGT ATCGCGTCGG GCGCCACCGC GGACCGCAGA TCTACAGCGG CTACAGCGCC
AACACCGATA CCATCGTCGC GGCTGCCGAG TCGTACATGA CGGCGCTCAA CAAGATGATC
GCGGCGCGGC AGGAACGTCT CAGCGCTGAA AACGCTGCGT ATGCCGCCGG ATATGATCGC
AACAAGCCAA CGTATGCGGT CGACCTGTTC GGCAAGAATG CAACCGAGTG A
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| Protein sequence | MEDHVRIFDT TLRDGEQAPG CTMTLEEKLE VARQLARLGV DIIEAGFPAA SPGDWAAVHE
IARTVGTPDG PIIAALARAN KDDIDKAWSA IQPAAKKRIH TFISSSDIHI EHQLRSTREE
VLERARMMVR YARSLCDDVE FSPMDATRSD PEYVYRMLAA VVEEGATTLN IPDTVGYATP
EEYAELIAGI YRHVPGAEKV IISTHCHDDL GMAVANSLAG VRAGARQIEC TINGIGERAG
NASLEEVVMA LKTRRSFFGV DTRINTRELA RSSRLVSTII GMPVPPNKAI VGANAFAHES
GIHQDGVLKH RMTYEIMDAT TIGLDGNAIV LGKHSGRNAL RTKLAAMGYE FDSEEEFNQV
FQRFKELCDK KKVVDDRDLE VLATGGSLHT PDLYRLDHVQ VTCGTGVTPV ATVRITDPDG
NTHTTAAHGT GPVDAIYKAI DKIVGRPNEL IEFSIKAVTE GIDAVAEVSV RIREPGNEVQ
EGEYRVGRHR GPQIYSGYSA NTDTIVAAAE SYMTALNKMI AARQERLSAE NAAYAAGYDR
NKPTYAVDLF GKNATE
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