Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_1959 |
Symbol | |
ID | 5208921 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 2438137 |
End bp | 2438625 |
Gene Length | 489 bp |
Protein Length | 162 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640595567 |
Product | hypothetical protein |
Protein accession | YP_001276296 |
Protein GI | 148656091 |
COG category | [S] Function unknown |
COG ID | [COG2862] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACGCGCC TGATTGGACT GATACGCTAC ATCATTATTG TCGCAGTGCT GGCGACCCTC ATTGCAGCAA CGGCGCTGAT CCTGTTTGGC ACAGTTGAAA CATATGTGGT CATACGCGAT GTTTTTTCAA AAGGCGAGTT TACCTCGAAA GTCGCCAAAG CGCTGTTGCT CAGTTTTATC GAGATCACCG ACATTTTCCT GCTGGCGACG GTGCTCTACA TTGTTGCACT GGGATTGTAC GAATTGTTCA TCGACCACCA GGTGCCGGTG CCAAACTGGC TCGAAATCCG CACCCTCGAT GATCTGAAAG ACAAACTGAT CGGCGTTATC ATCGTCGTTA TCGGTGTCGG ATTTCTCGGT CAATTCACCA CCTGGAACGG CGAGACGAAC CTGCTGATTT CGGGCGGCGG CGCGGCGCTG GTTATCGCGG CGCTCACCTT CTTTCTCGGT CAGAAAAGCA AAAAGGACAA AGACCAGGAC AAAGAATAG
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Protein sequence | MTRLIGLIRY IIIVAVLATL IAATALILFG TVETYVVIRD VFSKGEFTSK VAKALLLSFI EITDIFLLAT VLYIVALGLY ELFIDHQVPV PNWLEIRTLD DLKDKLIGVI IVVIGVGFLG QFTTWNGETN LLISGGGAAL VIAALTFFLG QKSKKDKDQD KE
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