Gene RoseRS_1959 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_1959 
Symbol 
ID5208921 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp2438137 
End bp2438625 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content52% 
IMG OID640595567 
Producthypothetical protein 
Protein accessionYP_001276296 
Protein GI148656091 
COG category[S] Function unknown 
COG ID[COG2862] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGCGCC TGATTGGACT GATACGCTAC ATCATTATTG TCGCAGTGCT GGCGACCCTC 
ATTGCAGCAA CGGCGCTGAT CCTGTTTGGC ACAGTTGAAA CATATGTGGT CATACGCGAT
GTTTTTTCAA AAGGCGAGTT TACCTCGAAA GTCGCCAAAG CGCTGTTGCT CAGTTTTATC
GAGATCACCG ACATTTTCCT GCTGGCGACG GTGCTCTACA TTGTTGCACT GGGATTGTAC
GAATTGTTCA TCGACCACCA GGTGCCGGTG CCAAACTGGC TCGAAATCCG CACCCTCGAT
GATCTGAAAG ACAAACTGAT CGGCGTTATC ATCGTCGTTA TCGGTGTCGG ATTTCTCGGT
CAATTCACCA CCTGGAACGG CGAGACGAAC CTGCTGATTT CGGGCGGCGG CGCGGCGCTG
GTTATCGCGG CGCTCACCTT CTTTCTCGGT CAGAAAAGCA AAAAGGACAA AGACCAGGAC
AAAGAATAG
 
Protein sequence
MTRLIGLIRY IIIVAVLATL IAATALILFG TVETYVVIRD VFSKGEFTSK VAKALLLSFI 
EITDIFLLAT VLYIVALGLY ELFIDHQVPV PNWLEIRTLD DLKDKLIGVI IVVIGVGFLG
QFTTWNGETN LLISGGGAAL VIAALTFFLG QKSKKDKDQD KE