| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_1948 |
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| Symbol | |
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| ID | 5208910 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 2412156 |
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| End bp | 2414723 |
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| Gene Length | 2568 bp |
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| Protein Length | 855 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640595557 |
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| Product | 1A family penicillin-binding protein |
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| Protein accession | YP_001276286 |
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| Protein GI | 148656081 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
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| TIGRFAM ID | [TIGR02073] penicillin-binding protein 1C
[TIGR02074] penicillin-binding protein, 1A family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGGTAA AGCCGAACAG CGGTTCGATC TATTGGCGAG GTTTCATCGC GCTGATACGC
TTTCTCTGGC GTCTTTGCCT GGCATTCGTG AAATTGACGA TCGTGGCGAC CATCCTGACG
GCGCTGGCGG TCTTCGTCGT CTACCGGCAC TACAGCCGCG ATCTGCCCGA TCCGGCGCAG
ATCGGGCGAC ACCGCCCGGC GGAAACGGGG TATATCTATG CGCGTGATGG AACACTGCTC
TACGAACTGA TCGATCCGCT GAGCGGCAGA CGCACCGTTG TGCCGTTCGA GCGTATTCCG
CGCATCCTGA TCGACGCGAC TGTCGCCGTT GAAGATGCCG GTTTCTGGAC CAACCCCGGC
GTCGATCTGC GCGGCATTCT GCGCGCGTTG ATCCTCAACT ACCAGGCGGG CGAAGTGGTC
AGCGGCGGTT CAACGATCAC TCAGCAACTG GTGCGAAACG TCCTGCTCTC GCCCGATGAG
CGCGACGACC TCTCGCTCGA CCGGAAACTG CGCGAAGCCA TCCTGGCAAT CGAAGTATCC
CGTCGCTACA GTAAAGAACA GATCCTTGGC GTGTACCTGA ACGAAGTCTA CTATGGCAAT
CAGGCATACG GCATCGAAGC TGCGGCGCAG TCCTATTTCG GCAAACACGT CTGGGAACTC
TCAGCAGGCG AAGCCACTCT GCTCGCCGGT CTTCCCCAAT CGCCAACAAC CCTCAATCCG
CTGCACAATT TCGCCGGAGC GAAGCAGCGT CAGCGCACCA CCCTCGATCT GATGGTCAAA
TACGGCTATC TGACTGCAAC AGAGGCGCAG GAGATCTTCG AAGAGCCGCT ACGTTTCGCC
CCGATTGCCA GAGACATCAC GGCGCCGCAC TTTGTGTTTT ACGTCATCCG GTTGCTCGAA
GAGCGTTACG GACCGGAGAC GCTCTACCGC AGCGGATTGC GTGTCGTGAC GACGCTCGAC
CCGCAGTGGC AGGCGGAAGC GGAACGCATC GCCCGGCAAT GGATCCGCGA AGGTGGACCG
GGATATACGC CCCTGCGTGA TCGGAACGCA ACCAATGCCG GTGTGGTGAT GCTCACGCCC
GACGCGCAGA TCATTGCGAT GGTCGGCAGT ATCGATTACA ACGATCCAAC CATCGACGGG
CAGGTGAATG TCACCCTCGC GCCGCGTCAA CCGGGTTCTG CGCTCAAGCC GGTGGTGTAT
GCCGCTGCGC TCCAGCGGGG ATGGACGCCA GCGACGATCA TCTGGGATAC GCCGGTGACA
TACCCTGCTG GCGATGGAAC TGTCTACGCG CCACGCAACT ACGACAACGC CTTCCACGGT
CCGCAACGCC TGCGTATGGC GCTGGCAAAC TCCCTCAACA TTCCGGCAGT CCGAACCCTC
GAATATGTCG GCATCGAGAA CTTCGTATCG CTTGCCCACC GCATGGGAAT CACCACCCTG
AACGACCCGC AGCGTTACGG TTTGCCGCTG GCGCTCGGCG CTGGCGAGGT GCGCCTGCTC
GACCTGACGG CAGTGTACAA TACCCTTCGC AACGGCGGAC GTTATCGCCC GCCAGCAGCG
ATCCTGAAGA TCACGAATGC GCGCGGTGAA ACTCTCGAAA CCCTGAACGA CACCCCCGGT
CGTCAGACCC TCGGCGAACG CGGTGAACAG ATCGCCTATC TGATCACCGA CATCCTCAGC
GACAATGCCG CGCGCCGGTC CATGTTCGGG CGAAACAATG TGATGGAACT CCGCGACGGG
CGACCGGCTG CGGTCAAGAC CGGCACCAGC AATGAGTGGC GCGACTCCTG GACGGTCGGA
TACACGCCCG ACATTACGAT AGGCGTGTGG GTGGGCAACA ACGACAACGC ACCGATGCAG
GAAGTTGCTG GCTCGAACGG CGCCGGGGTC ATCTGGCGCG CTCTGATGGA ACGCTACCAC
GAAGGGCGCC CTATCCTGAC ATTCGAGCCG CCAGATGGGA TCAGCGAAGT GGTGATCTGC
GCCGACACCG GCGCACTCGC GGATGAGCAT TGCCCGCGAC CGATCAGCGA GCGATTCATT
GCTGGCACTG AGCCGCGCAC CAGTGATGTG ACCATCCTGA CCGTTCGCGT CTCCGATGAC
GGCGCCTGTC TGGCGGCATC GTACACCCCA CCGGAGCGTG TCCGCCAGGT CACATTCGTT
GTTTATCCGC TGGCATTCCG GGACTGGGCG GAGTCACATG GCATTCCCCA ACCGCCACAG
CGCTACTGCC CGCCGCCGGA AGCCTCAACC GGGCGTGAAG GAGGGATCAT CGCACGAATC
ACCCAACCGA TCACTAACAC GACCGTGCAC GGACCGCTGG TGTATGTGCG GGGCGCCGCT
CTCGGCGTCT ATGCACTTGA GATCGCACCC GGTCGCAGCC CCCAGGGAGG CTGGCGCACG
ATTGCCCGCG GCGAGGCGAT CCAGGAAGGT ATGCTGGGCA TCTGGCAGAC AGGCGACGAC
GCGCCGGGAG AATATACACT GCGTCTGCGC GTGACGACCC GCGAGGGGAT TCTGCTCGAA
CAACACGTGT GGGTGCGGCT GGAAGGAGAA GCAGGAAGCG GGAACTGA
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| Protein sequence | MQVKPNSGSI YWRGFIALIR FLWRLCLAFV KLTIVATILT ALAVFVVYRH YSRDLPDPAQ
IGRHRPAETG YIYARDGTLL YELIDPLSGR RTVVPFERIP RILIDATVAV EDAGFWTNPG
VDLRGILRAL ILNYQAGEVV SGGSTITQQL VRNVLLSPDE RDDLSLDRKL REAILAIEVS
RRYSKEQILG VYLNEVYYGN QAYGIEAAAQ SYFGKHVWEL SAGEATLLAG LPQSPTTLNP
LHNFAGAKQR QRTTLDLMVK YGYLTATEAQ EIFEEPLRFA PIARDITAPH FVFYVIRLLE
ERYGPETLYR SGLRVVTTLD PQWQAEAERI ARQWIREGGP GYTPLRDRNA TNAGVVMLTP
DAQIIAMVGS IDYNDPTIDG QVNVTLAPRQ PGSALKPVVY AAALQRGWTP ATIIWDTPVT
YPAGDGTVYA PRNYDNAFHG PQRLRMALAN SLNIPAVRTL EYVGIENFVS LAHRMGITTL
NDPQRYGLPL ALGAGEVRLL DLTAVYNTLR NGGRYRPPAA ILKITNARGE TLETLNDTPG
RQTLGERGEQ IAYLITDILS DNAARRSMFG RNNVMELRDG RPAAVKTGTS NEWRDSWTVG
YTPDITIGVW VGNNDNAPMQ EVAGSNGAGV IWRALMERYH EGRPILTFEP PDGISEVVIC
ADTGALADEH CPRPISERFI AGTEPRTSDV TILTVRVSDD GACLAASYTP PERVRQVTFV
VYPLAFRDWA ESHGIPQPPQ RYCPPPEAST GREGGIIARI TQPITNTTVH GPLVYVRGAA
LGVYALEIAP GRSPQGGWRT IARGEAIQEG MLGIWQTGDD APGEYTLRLR VTTREGILLE
QHVWVRLEGE AGSGN
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