Gene RoseRS_1947 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_1947 
Symbol 
ID5208909 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp2411295 
End bp2412110 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content59% 
IMG OID640595556 
Producthypothetical protein 
Protein accessionYP_001276285 
Protein GI148656080 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCATC TCATATCGCT CAACCGGATC GCGATCCTTG CGCTTGTCGC ATGCGTGGCG 
CTGTTCCTTT TCGCGCAACC CCAACCCCTG GTGCTGTCGC GCTGGTCGCC GGTCAGTCCA
TCAGTGCCGA CAATCGGCGC TGTTGCCGTG CCGGTTGCGG ACGTATCGCC GTTGAACATC
GTAGTGAACG ACGGACTCTA CATTGACGAA CGTGATCGAC TCGATCAGGA TGCACGCCGC
GCCTATGCGT ATGTCGCTGC GCGATTCGGC AGCGAACTGA TGAGTCCGCT CACCGTCGCA
TTCATCCAGG ATGCCGGATG CGCCCTGAGC GGCATTGCCT ATACTGATAT TCGTCGGGTT
CAGGTTTTCA CCTGCAATGC TATCGGGCGC GAACGGGCGA TTGCCATTCT GGCGCACGAA
TATGTGCATC AACTCCAGCA GGACCGGTAT GGGTCGCGGC ATCTGAGCGC CGATCTGATC
CTGTCTGAGG GCATGGCAAC CTGGGGAGCG GGGGTCTACT GGCTTGGCGA ATACCCCGAT
TTTTGCAGAT ATGTGCGCGC TCAGCGGACG AACGGTATCT CCCATCCCCT GGCAACCCAC
TACGCCGGGC GTGGCGTTGC ACTGATGAAC GCGCTCTACT ACCAGTGGGC AAGTTTTGTT
GAGTTCCTCA TCGACCGGTA TGGGCGTGAA CGTCTGGACG CCGTGTACGT TACCGGCGCA
GGAACGCCCG GATCGGCAGA TTATCGCGCA GTGTACGGAA AAGACCTGGC AACGCTGGAA
CAGGAATGGA TCGCCTGGCT GGAAGCCGCT CCTTGA
 
Protein sequence
MNHLISLNRI AILALVACVA LFLFAQPQPL VLSRWSPVSP SVPTIGAVAV PVADVSPLNI 
VVNDGLYIDE RDRLDQDARR AYAYVAARFG SELMSPLTVA FIQDAGCALS GIAYTDIRRV
QVFTCNAIGR ERAIAILAHE YVHQLQQDRY GSRHLSADLI LSEGMATWGA GVYWLGEYPD
FCRYVRAQRT NGISHPLATH YAGRGVALMN ALYYQWASFV EFLIDRYGRE RLDAVYVTGA
GTPGSADYRA VYGKDLATLE QEWIAWLEAA P