| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_1929 |
|---|
| Symbol | |
|---|
| ID | 5208890 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | - |
|---|
| Start bp | 2393563 |
|---|
| End bp | 2394012 |
|---|
| Gene Length | 450 bp |
|---|
| Protein Length | 149 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640595538 |
|---|
| Product | heat shock protein Hsp20 |
|---|
| Protein accession | YP_001276268 |
|---|
| Protein GI | 148656063 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0071] Molecular chaperone (small heat shock protein) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.638493 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.0128011 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAACCG CGTTGACTCG TTTCGAGCCA TTCGCTGAAG CGCTGCGGCT GTCGGACGCA
GTCGAGCAAC TGCTGAACGA GAGCTGGGTG ATGCCACGGA GCTTCTTCAG CGGTTGGGCA
GGAACGTCGC GCATTCCGTT GGACCTCTAC GAAACTGATG AGGCATACGT GGTGACGGCG
CTCATGCCGG GTGTTCCCAG CGACAAGATC GATATCCAGC TCGAACAGAA CACGCTCACC
ATTCGTGGTG AGGTGCATGC TGAGCAGCCG AAGGATGCGC ACTATCTGAT CCAGGAGCGC
GCGAGCGGCA AGATCGAGCG GAGCGTCCGT CTACCCGCGA CGGTAGACGC AGACAAGATC
TCGGCGTCGC TCAACGATGG TGTGCTGACC ATCCGGCTGC CGAAAGTCGA GCATGCTCGA
CCGCACCGCA TCACCATCCA GGCTGCGTAA
|
|---|
| Protein sequence | MTTALTRFEP FAEALRLSDA VEQLLNESWV MPRSFFSGWA GTSRIPLDLY ETDEAYVVTA
LMPGVPSDKI DIQLEQNTLT IRGEVHAEQP KDAHYLIQER ASGKIERSVR LPATVDADKI
SASLNDGVLT IRLPKVEHAR PHRITIQAA
|
|---|
| |