Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_1914 |
Symbol | |
ID | 5208875 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 2378366 |
End bp | 2379235 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640595523 |
Product | alpha/beta hydrolase fold |
Protein accession | YP_001276253 |
Protein GI | 148656048 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000204003 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.0000086861 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGAGGAACA ACGGCTATCC GGTAGACGCC CCGCGACAAT TCTATCGCTG GCGCGGCTAT CGAGTCGCGT GCTACACCGC AGGCGCCGGT CCTGCAATCC TCTTGATCCA CAGCATCAAC GCAGCCGCGT CCTCGTTCGA AATGCGCCGT CCGTTCGCAG CGCTTCGCAC CGATCATCGC GTCTTCGCGC TTGATTTTCT GGGATTTGGT GGATCGGATC GACCGCAGCG CATATACTGC GCTGACGATT ACATTGACCT GATCGGCGAT TTTGTGCGTG ATACAGTTGG ACGGGGCGCA GTGGTGATCG CCAGTTCGCT CGGCGCTGCC TACACCATCC GGGCAGCCGC ACGGGATGCC GATCTCTTCG GACCTCTGAT CCTGATCTGT CCTACGGGTA TGAGAAATCT CGTGCATCCG CAACAACCCG GACTGGCGTA CAGGACGCTT GCAAGTCCCT TCGGCGATCT GGTCTTTCGC CTGCTGGCGA GCCGCTCCAG TATTGCCTAT TTTCTGCGCG CGCAATCGTA CTACGATCCA GCCGTTGTGA CCGATGAACT TATCGAAGGG TTCTACCGTG CAGCGTACCA GGCAGGCGCA AAGTGGGCGC CGATCTGTTT TCTGACGGGG TTGTTGAACT GTGATGTGCG TGATGCCTTC GGGCAACTGC GTCAGCCGAT CCTGCTGGTG TGGGGTCGTC AGGCGGATCT GACGCCGCTA CGCAGCGCCG ATGACTTTCT GGCGCGCAAT CCCCGCGCGC GCCTTGCGGT GGTAGACAAG GCGCGTCTCT CGGTGCAGGA TGAACGACCA GAGGAGTTCA TCCATCTTGT GCGAGAGTTC CTGGCAGCGC CGCACCCATC CGTCCCATAG
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Protein sequence | MRNNGYPVDA PRQFYRWRGY RVACYTAGAG PAILLIHSIN AAASSFEMRR PFAALRTDHR VFALDFLGFG GSDRPQRIYC ADDYIDLIGD FVRDTVGRGA VVIASSLGAA YTIRAAARDA DLFGPLILIC PTGMRNLVHP QQPGLAYRTL ASPFGDLVFR LLASRSSIAY FLRAQSYYDP AVVTDELIEG FYRAAYQAGA KWAPICFLTG LLNCDVRDAF GQLRQPILLV WGRQADLTPL RSADDFLARN PRARLAVVDK ARLSVQDERP EEFIHLVREF LAAPHPSVP
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