Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_1912 |
Symbol | |
ID | 5208873 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 2374082 |
End bp | 2375455 |
Gene Length | 1374 bp |
Protein Length | 457 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640595521 |
Product | PUCC protein |
Protein accession | YP_001276251 |
Protein GI | 148656046 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.199112 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.0000123013 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGAATCTGC TTCGCGCAAT CGGTCGGTTC CTGCTGGGCG CGCTCAAGGT GTTGCGTCTG GCGCTGCCCA AACTGGGTGT CGGATGGATG TTCGCCCTGC TGACCAGTAA CTTCAACCGG GTGTCGATTG TGGAGTTGGG CGTGATGGCG ATCATCGTCA CAACGATGAT CGGTCTGCAC CACTTCCTGT CGCCGTTCCA GGTGGTGTGG GGACGGATCG CCGATAGTCA TCCGGTCTTC GGGTTGCGTC GCACGCCGTA CCTGCTGATC GGCGCAACGG TCGCCAGTCT GGTCTTCCTG GCGCTGCCGT CGGTGGCGGT TGCAATGGGT GAGGGTTCGG TGCTGGCAAT TGTGGCGGGG TATGCGTTGC TGATCCTGTT CGGCGTCAGC ATTGCGGCAA TGGGTGACTG CCACCACGCG CTGATCGCCG AGGTGACCAA TCCCAGGACG CGCGGCGGTG TGATTGCGGT GGTGTGGACG TTCACGATTA TGAGCACGAT CATCGCCGCA ACGGTGATCA AGGCGCAGAT GCCGTCTTAT ACCCCTGAAG CGATGCAGGC GCTCTACAAT CTGACCCCGC TGGTGGTCAT TGGTTCGGCG CTGCTCGGTG TTCTCGGCAT TGAGAAGCGT CTGAGCCGCG AGGAACTGGC AGTCGCCCTT GAGCGCGCGC GCGCAGCGGC GCCTCCCGGA AATCCGTTGC GTGCGGCTGT CGGTCTGTTT CGCCAGAACC CGCAGGTGCG CGCCTTCTTC GGCTTTGTGT TCCTCTCGAT CGTCGGCATC TTCCTGCAGG ACTCGATCCT GGAAGTCTTC GGCGCTGAGG TCTTCCATAT GACGATCAGG GAGACGACGA CATTCACCCA GACGTGGGGC GGCGGCGTGC TCGGCGGTAT GCTGATCATG GGTCTCTTGA GTTCCATTTT CCCGATTGGC AAGAAGGTGA TTGCGCTGAT CGGCGGCGTT GGCACCGCGT TCGGTTTGGG GTTGCTGGCA GCCTGTGCTC TGACTGAGCA GCGTTCGTTG CTCAACCCGG CGATTATGCT CATGGGCTTC AGCACTGGTC TCTACAACGT TGGTGCGCTG TCGTTGATGA TGGATATGAC CGTCGAGGGC GCCACAGGTC TCTATATGGG CATGTGGGGC ATGGCGCAGG CGTTTGGGAC GGCGACGGCG AATATTCTGG CGGGTGCGCT GCATACGGTG CTGATCGAGG CGCAGGTGCT GGGTCAGACG CTGGGGTACG GGGTGATCTT TGGTCTGGAA GCGGTGCTGA TGGTCATCGG CATTGCGCTG CTGTCCGGCG TCAGCGTCGA GGCGTTCCGT GGATTGACCC GCACCGATCT GACCCGCGCA ATGGAAGCTG GCGCAGTGGC GTGA
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Protein sequence | MNLLRAIGRF LLGALKVLRL ALPKLGVGWM FALLTSNFNR VSIVELGVMA IIVTTMIGLH HFLSPFQVVW GRIADSHPVF GLRRTPYLLI GATVASLVFL ALPSVAVAMG EGSVLAIVAG YALLILFGVS IAAMGDCHHA LIAEVTNPRT RGGVIAVVWT FTIMSTIIAA TVIKAQMPSY TPEAMQALYN LTPLVVIGSA LLGVLGIEKR LSREELAVAL ERARAAAPPG NPLRAAVGLF RQNPQVRAFF GFVFLSIVGI FLQDSILEVF GAEVFHMTIR ETTTFTQTWG GGVLGGMLIM GLLSSIFPIG KKVIALIGGV GTAFGLGLLA ACALTEQRSL LNPAIMLMGF STGLYNVGAL SLMMDMTVEG ATGLYMGMWG MAQAFGTATA NILAGALHTV LIEAQVLGQT LGYGVIFGLE AVLMVIGIAL LSGVSVEAFR GLTRTDLTRA MEAGAVA
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