| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_1909 |
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| Symbol | |
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| ID | 5208870 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 2370004 |
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| End bp | 2371710 |
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| Gene Length | 1707 bp |
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| Protein Length | 568 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640595518 |
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| Product | light-independent protochlorophyllide reductase subunit B |
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| Protein accession | YP_001276248 |
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| Protein GI | 148656043 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2710] Nitrogenase molybdenum-iron protein, alpha and beta chains |
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| TIGRFAM ID | [TIGR01278] light-independent protochlorophyllide reductase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.000998915 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCGACTGG CTCTCTGGAT GTATCAGGGC ACTGCCCATC ACGGCGTCGG GCGGATCGCC
AACAGCATGC GCGGGGTGCA CGCTGTCTTC CACGCTCCCC AGGGAGATGA CTACGTCAAT
CCGATCTTCA CCATGCTGGA ACGTACCCCT GATTTCCCCC GGATGACGAC CAGCATTGTC
AGCGGGCGCG ACCTGGCGCA GGGTACGGTG CGTCTCCCTG AAACACTGCG CGCTGTCGAT
GCGCAGGTTC ATCCCGATCT GATCATCGTG TGCGCCAGTT GTTCGACCAT TCTGCTCCAG
GAAGACCTGG AACGGATGGC GCGCAGCGCC GGAACGAGCG CAGAGGTGCT GGTGTATGAC
GCCAATCCGT ACCGGATGCA GGAGGTTCGT TCCGCCGATG GGCTGCTGAC GACGCTGGTG
CAGCGTTTTG CGCGCCCGCA GGCGCCGCTG CCGACGCCGT CTGTCAACAT TCTCGGTCCG
GCGTCGCTCG GCTTCCACAA CCGCAGCGAC CTGATCTGCC TGCGGCGCAT GCTTGCGACA
CTCGGCGTGC AGATCAACGT GGTGGCGCCG CTCGGCGCAT CGATCCACGA TCTGGAGCGT
CTGCCGGCGG CATGGGCAAC AATTGCGCCG TACCGTGAAT TGGGTCAGAA CGCCGCCCGC
TGGCTCGAAG ATCAGTTCGG CATCCCGGCG TTGACCGACG CTCCTATCGG GGTGCAACCG
ACATTACGCT GGCTCCGACG ACTGGTTGAG ACGCTGAATG AAGCCGGTGC GCGCCTGCAA
CGCCTGTCAA CACCGCTGCG CCTGCCGCCG CTGACTGCTT TCTCACTCGA CGGGATGAGC
GCGCCGAGTT CGGTTCCCTG GTTCGCGCGC ACTGCCGACA TGGAAAGCTA CAGCATGAAG
CGCGCCTTTG TCTTCGGCGA TGCCACCCAT ACCGTCGGCA TGGTGAAGTT TCTGCGCGAC
GAGTTGGGCA TGCAGATCGC CGGAGCGGGA ACCTACCTGG AGGAAGAGGC AGAGTGGGTG
TACCAGGAAC TCAAAGAGTA TCTGCCCCCC GATGATTCGG GATCGCCCAA ATCTTCCTTT
CTGGCGACCG ATGTGTTTCA GCATGTCGCG CGACGGATCG CCGACCTGTC GCCCGAACTG
GTCTGTGGCA CGCAGATGGA ACGCCACGCC TGCCGCAAAC TCGACATCCC CTGCCTGGTG
ATCGCGCCGC CGACGCATAT CGAAAACCAT CTGTTGAGCT ACCGACCGGT GCTCGGCTTC
GATGGCGCCG ACGTCCTGGC GGACGCAGTC TACACCACAG CGACGCTGGG CATGGAAAAG
CATCTGATTG ATATGTTCGG CGACGCAGGG CTGGACTATG ACGAACCGCA AACCGGGGAA
CCGCGAACCG AAAACCAGGA GTTGAGAGTC GAAAACCGGG CATCGGCGAA CGGACATCCG
GAAGCAGGCG TTAGCGTCGG CGCCGCTGAA CCTTCGGCTG CTCCATCCAG GAGCGTCGTG
ACGGAAGAAT CCAATCGCGC AACCACACCA TCATCTTCTA CCGTTCACCC CGTCTGGACT
CCAGACGCAC AGGCGATGCT GAAGAAGATA CCCTTCTTCG TGCGGGGACG GGTGCAAAAG
AACGTCGAAC GGTACGCGAT GCAGCACGGG TATGCAACGA TCACCGCTGA GGTTCTGGTT
GAAGCGCGAG AGGCATTGGG CGGTTGA
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| Protein sequence | MRLALWMYQG TAHHGVGRIA NSMRGVHAVF HAPQGDDYVN PIFTMLERTP DFPRMTTSIV
SGRDLAQGTV RLPETLRAVD AQVHPDLIIV CASCSTILLQ EDLERMARSA GTSAEVLVYD
ANPYRMQEVR SADGLLTTLV QRFARPQAPL PTPSVNILGP ASLGFHNRSD LICLRRMLAT
LGVQINVVAP LGASIHDLER LPAAWATIAP YRELGQNAAR WLEDQFGIPA LTDAPIGVQP
TLRWLRRLVE TLNEAGARLQ RLSTPLRLPP LTAFSLDGMS APSSVPWFAR TADMESYSMK
RAFVFGDATH TVGMVKFLRD ELGMQIAGAG TYLEEEAEWV YQELKEYLPP DDSGSPKSSF
LATDVFQHVA RRIADLSPEL VCGTQMERHA CRKLDIPCLV IAPPTHIENH LLSYRPVLGF
DGADVLADAV YTTATLGMEK HLIDMFGDAG LDYDEPQTGE PRTENQELRV ENRASANGHP
EAGVSVGAAE PSAAPSRSVV TEESNRATTP SSSTVHPVWT PDAQAMLKKI PFFVRGRVQK
NVERYAMQHG YATITAEVLV EAREALGG
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