Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_1908 |
Symbol | chlL |
ID | 5208869 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 2369162 |
End bp | 2369983 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640595517 |
Product | protochlorophyllide reductase iron-sulfur ATP-binding protein |
Protein accession | YP_001276247 |
Protein GI | 148656042 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1348] Nitrogenase subunit NifH (ATPase) |
TIGRFAM ID | [TIGR01281] light-independent protochlorophyllide reductase, iron-sulfur ATP-binding protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00331132 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGAGTCTCA CACTTGCCAT TTACGGAAAA GGTGGCATCG GCAAGAGCAC AACCAGTTCG AACCTGTCGG CGGCGCTGGC GCTCAAAGGC GCGAAGGTGC TTCAGATCGG CTGCGATCCC AAGCACGACA GCACCTTCGC CCTGACCGGA ACGCTGCAAC CGACGGTCAT CGATGTGTTG ACCGAAGTTG ATTTCCACCA CGAAGAGGTA TCGGTCGAGG ATGTGGTGCA TACCGGTTTT GCCGGGGTGG ACACGCTGGA GTCGGGCGGT CCGCCGGCTG GCAGCGGCTG CGGCGGTTAT GTCGTCGGCG AGACGGTCAA ACTGCTGCAC GAATTCGGGC TGTACGACAA ATACGATGTG ATTGTGTTCG ATGTGCTTGG CGACGTGGTG TGCGGCGGGT TCTCGGCGCC GCTGAACTAT GCGGACTACG GCATCATTAT CGCCTGCAAC GACTTCGACA GCATTTTCGC CGCCAACCGC CTGTGCCTGG CGATCAAGCA GAAAAGCGCG CGTTACCGCG TCGAACTTGC CGGCATCATT GCCAATCGCG TGGATTACGA ACTTGGCGGC GGCACGACGT TGCTGGAACA GTTTGCCGAA ACCGTCGGCA CACGCATCAT TGGACGGGTG CCGTACCACG ATCTCATCCG GCGCTCGCGG TTGATGGGCA AGACCCTGTT CGAGATGGAG GGTCCAGGGA AGGAGGAATG CACCGCACCC TTCCTGGAGA TGGCGGAGGA ATTGCTGAAT CGTCCGCGCT CGACCGTTCC GAAGCCCCTG GGTGATCGTG AGATCTTCAA TGTGATCGGC GGATGGCGAT GA
|
Protein sequence | MSLTLAIYGK GGIGKSTTSS NLSAALALKG AKVLQIGCDP KHDSTFALTG TLQPTVIDVL TEVDFHHEEV SVEDVVHTGF AGVDTLESGG PPAGSGCGGY VVGETVKLLH EFGLYDKYDV IVFDVLGDVV CGGFSAPLNY ADYGIIIACN DFDSIFAANR LCLAIKQKSA RYRVELAGII ANRVDYELGG GTTLLEQFAE TVGTRIIGRV PYHDLIRRSR LMGKTLFEME GPGKEECTAP FLEMAEELLN RPRSTVPKPL GDREIFNVIG GWR
|
| |