Gene RoseRS_1897 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_1897 
Symbol 
ID5208858 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp2353526 
End bp2354992 
Gene Length1467 bp 
Protein Length488 aa 
Translation table11 
GC content61% 
IMG OID640595506 
ProductGAF sensor signal transduction histidine kinase 
Protein accessionYP_001276236 
Protein GI148656031 
COG category[T] Signal transduction mechanisms 
COG ID[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0969879 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACAGC AATCTGTCTC TCCACGACGG GGGCGAACCT CGTCCGCCAA TGGACAACAG 
GAAGAAGTTG CTCATTTGCG GGCTGAGCTG GCGGCGGCGC ATGCGCGTAT TGCGGAGCTG
GACGCACAAC TGGCTGCGTC TGTGCGACAG ACACGCCTGG TCAATGAGCG CCTGAATACG
ATTCTCACGG TGAGCGCAGC ATTGCTGATC ACCCACGAGA TAGATACGGT CATGCAGGTG
GTGGTGCGCG AAGCAGTGCA CCTGTTTCCC GATACCAGCG GTGCGTTACT GTTTCTGGTC
GATCAGGCGG GAATGCGGTT GCGTCTCGCT GCGAGCAGCA GCGGGCAGAC AGGCGTGCCT
GTGCTGCGAC CGGGTCAGGG TCCGGCGGGA CGTGCGTTTC TTTCGCCTCG CGCCATGCTG
ATCGCTGGTC CGGCGCTCGA GGAGGCGCTG AGTGAACTGA GCGAGACGCA GCGTGCACAG
GAACGCGGCG CTCTGACGTA CTGGCCCCCA AGCAGCGCTT TGCTGACGCC GTTGCGGATC
GAAGACACCC GGCTTGGTGC GCTGGTCGTG TATGGCAACC AGAATCCGCA CCTGATCCAT
CCGCGTGATA TTCCCTTCGC GCAGGCGCTG GCAGACCTGA CGGCGGTGGC GATTGCAGAA
CATCGTCAGC GGACGCGGGC GGCGGCATTG CAGCGCGATC TCGATCAGAC GCAGTCGCTG
CACGCCGAGG CGCAGGCGCG CCTCAGTGCA GCGCAGGCGC AGTTGCTGCA AAGCGCAAAA
CTTGCCGCTG TCGGCGAACT GGCGGCTTCA GTGGCGCACG AAATCAATAA CCCGCTCTAC
GCGGCGCGGA ATAGCCTCTA CCTGGTCGAA CAGGATATGC CGCCCGATGC GCCGCAACGC
CATTTCCTTA CGATTGCCCA GAATGAGCTC GGTCGTATTG CGCGCATCAT CACCCGCATG
CGCGATTTTT ATCGCCCGGC GCGGGATGAA CTGGAGCTCA CTGAGGTCAA CGATCTGCTG
GCGGAAACGA TTGAACTGGT GCAGACCCAT CTGCGTCATG GGCATGTGAC GGTCACTGCC
AGTTTCTGTC CGAATCTTCC GCTTCTGGTC GCCCACCCGG ATCAGTTGCG TCAGGTCTTT
CTCAATTTGA TGCTGAATGC ATGTGATGCC ATGCCCAACG GCGGTCAGTT GCATATTTCA
ACCGAACTTT CCTGCCGTAA CGAGCGGGAT GAGCAGTGGG TCGTTGTTGC CGTGCGCGAT
ACTGGCGTCG GTATCAATCC GGAACATATG CCGCATCTGT TCGAGCCGTT CTACACCACG
AAACCGCAGG GCACGGGGCT TGGTCTGGCT ATCAGCGCCC ATATCGTGAC GCAGCACGGC
GGGCATATTC AGGTCGAAAG CACGCCGGGT GTCGGAAGTA CGTTTACTGT TTTGCTCCCT
GTTGATCGGG GAGTTGAGGA GGCCTGA
 
Protein sequence
MKQQSVSPRR GRTSSANGQQ EEVAHLRAEL AAAHARIAEL DAQLAASVRQ TRLVNERLNT 
ILTVSAALLI THEIDTVMQV VVREAVHLFP DTSGALLFLV DQAGMRLRLA ASSSGQTGVP
VLRPGQGPAG RAFLSPRAML IAGPALEEAL SELSETQRAQ ERGALTYWPP SSALLTPLRI
EDTRLGALVV YGNQNPHLIH PRDIPFAQAL ADLTAVAIAE HRQRTRAAAL QRDLDQTQSL
HAEAQARLSA AQAQLLQSAK LAAVGELAAS VAHEINNPLY AARNSLYLVE QDMPPDAPQR
HFLTIAQNEL GRIARIITRM RDFYRPARDE LELTEVNDLL AETIELVQTH LRHGHVTVTA
SFCPNLPLLV AHPDQLRQVF LNLMLNACDA MPNGGQLHIS TELSCRNERD EQWVVVAVRD
TGVGINPEHM PHLFEPFYTT KPQGTGLGLA ISAHIVTQHG GHIQVESTPG VGSTFTVLLP
VDRGVEEA