Gene RoseRS_1893 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_1893 
Symbol 
ID5208854 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp2350802 
End bp2351299 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content56% 
IMG OID640595502 
Producthypothetical protein 
Protein accessionYP_001276232 
Protein GI148656027 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism 
COG ID[COG4635] Flavodoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.227105 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.274153 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAACCC TGATCGTCTA CGCATCCTGG TTCGGGCACA ATCGCGAAAT CGCCAGACTC 
ATCGCCGACC AGATCTCGTC CTGCGCTTCA CACGTGATCT GCGCGCCGGT AGTTGCTGTA
ACTGCCAGCG ATACCATTGG ATGTGACCTG CTGGTGCTGG GGAGTTTCAC CCACGCTCAT
CACGCCAGCC GGCGCATGCG GCATCTGGTC GAGACCATTC CAGAACGCCG TCTCAAGCGT
ATGGCAGTAG CAGTTTTTGG CACGCAAACC ATGGACGAAC GACCATCCGG CGTCGATGAA
CTGGTCAACA TGCTGACGAA GCGCGGTGTG CGACTGATTG TTCCCCCGTT GAGGGTCATC
CTGCCAGTGC CGGATTTCGT ACCATGGTCA AGGATAACGC CTGTGGAACG CGCCAAAATT
AATGCGTTCG TACAGGCGCT GATGGATCGA TTAAAACCTG AAACTAGCGC GCAACAGGAG
ATATTGCCGT GGTCATAG
 
Protein sequence
MRTLIVYASW FGHNREIARL IADQISSCAS HVICAPVVAV TASDTIGCDL LVLGSFTHAH 
HASRRMRHLV ETIPERRLKR MAVAVFGTQT MDERPSGVDE LVNMLTKRGV RLIVPPLRVI
LPVPDFVPWS RITPVERAKI NAFVQALMDR LKPETSAQQE ILPWS