Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_1893 |
Symbol | |
ID | 5208854 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 2350802 |
End bp | 2351299 |
Gene Length | 498 bp |
Protein Length | 165 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640595502 |
Product | hypothetical protein |
Protein accession | YP_001276232 |
Protein GI | 148656027 |
COG category | [C] Energy production and conversion [H] Coenzyme transport and metabolism |
COG ID | [COG4635] Flavodoxin |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.227105 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.274153 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGAACCC TGATCGTCTA CGCATCCTGG TTCGGGCACA ATCGCGAAAT CGCCAGACTC ATCGCCGACC AGATCTCGTC CTGCGCTTCA CACGTGATCT GCGCGCCGGT AGTTGCTGTA ACTGCCAGCG ATACCATTGG ATGTGACCTG CTGGTGCTGG GGAGTTTCAC CCACGCTCAT CACGCCAGCC GGCGCATGCG GCATCTGGTC GAGACCATTC CAGAACGCCG TCTCAAGCGT ATGGCAGTAG CAGTTTTTGG CACGCAAACC ATGGACGAAC GACCATCCGG CGTCGATGAA CTGGTCAACA TGCTGACGAA GCGCGGTGTG CGACTGATTG TTCCCCCGTT GAGGGTCATC CTGCCAGTGC CGGATTTCGT ACCATGGTCA AGGATAACGC CTGTGGAACG CGCCAAAATT AATGCGTTCG TACAGGCGCT GATGGATCGA TTAAAACCTG AAACTAGCGC GCAACAGGAG ATATTGCCGT GGTCATAG
|
Protein sequence | MRTLIVYASW FGHNREIARL IADQISSCAS HVICAPVVAV TASDTIGCDL LVLGSFTHAH HASRRMRHLV ETIPERRLKR MAVAVFGTQT MDERPSGVDE LVNMLTKRGV RLIVPPLRVI LPVPDFVPWS RITPVERAKI NAFVQALMDR LKPETSAQQE ILPWS
|
| |