Gene RoseRS_1885 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_1885 
Symbol 
ID5208846 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp2340454 
End bp2340882 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content66% 
IMG OID640595494 
Producthypothetical protein 
Protein accessionYP_001276224 
Protein GI148656019 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000268985 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.937272 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGGAGC GCATTTGTCC GCAATGTGGT CACGGCAATC CGCTTGATCA TCACTTCTGC 
GGGAAATGCG GCGCAGCGCT GGAGCGTCTG CTTCCGGCGC CGCTGTCGCC GCAGCCGCTG
GCGCGCCTGA GCGCAGCGCT TCCGGCACGC TGGCGCGACG TCGGGCGGGC GGTGGCGATC
AGTGCGGTGG CGCTGGCGGC AGAAGCTGGC ATTGCCTGGC TGGCACGGCG GATCGAACAG
CGCCAGGTGC CGGTGGTTTC CTCCACGCCG CTAGCGCGGA TCGTCACTCC GGCTGCGCCG
CTGTCAACGC CGCGTGAAGC GACGAATATC GTCACGATCA TCAGTGAACG GGTGATCGAG
TTCATCGACG ACGGCAACGG AACGCGCCGC ATCAGCGAGC GCACATTCTG GCGTCGTATC
GAAGAGTAG
 
Protein sequence
MVERICPQCG HGNPLDHHFC GKCGAALERL LPAPLSPQPL ARLSAALPAR WRDVGRAVAI 
SAVALAAEAG IAWLARRIEQ RQVPVVSSTP LARIVTPAAP LSTPREATNI VTIISERVIE
FIDDGNGTRR ISERTFWRRI EE