Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_1885 |
Symbol | |
ID | 5208846 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 2340454 |
End bp | 2340882 |
Gene Length | 429 bp |
Protein Length | 142 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640595494 |
Product | hypothetical protein |
Protein accession | YP_001276224 |
Protein GI | 148656019 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0000268985 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.937272 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTGGAGC GCATTTGTCC GCAATGTGGT CACGGCAATC CGCTTGATCA TCACTTCTGC GGGAAATGCG GCGCAGCGCT GGAGCGTCTG CTTCCGGCGC CGCTGTCGCC GCAGCCGCTG GCGCGCCTGA GCGCAGCGCT TCCGGCACGC TGGCGCGACG TCGGGCGGGC GGTGGCGATC AGTGCGGTGG CGCTGGCGGC AGAAGCTGGC ATTGCCTGGC TGGCACGGCG GATCGAACAG CGCCAGGTGC CGGTGGTTTC CTCCACGCCG CTAGCGCGGA TCGTCACTCC GGCTGCGCCG CTGTCAACGC CGCGTGAAGC GACGAATATC GTCACGATCA TCAGTGAACG GGTGATCGAG TTCATCGACG ACGGCAACGG AACGCGCCGC ATCAGCGAGC GCACATTCTG GCGTCGTATC GAAGAGTAG
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Protein sequence | MVERICPQCG HGNPLDHHFC GKCGAALERL LPAPLSPQPL ARLSAALPAR WRDVGRAVAI SAVALAAEAG IAWLARRIEQ RQVPVVSSTP LARIVTPAAP LSTPREATNI VTIISERVIE FIDDGNGTRR ISERTFWRRI EE
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