Gene RoseRS_1875 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_1875 
Symbol 
ID5208835 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp2327404 
End bp2328051 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content66% 
IMG OID640595483 
Productamidophosphoribosyltransferase-like protein 
Protein accessionYP_001276214 
Protein GI148656009 
COG category[R] General function prediction only 
COG ID[COG1040] Predicted amidophosphoribosyltransferases 
TIGRFAM ID[TIGR00201] comF family protein 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCTGT TCAGATGGAT CGATCACCTT CTTAGCCTGC TTCTGCCGGA TCGCTGCGTC 
GGATGTGGTC AATTGGGGGC GCTGCTGTGC GATGCGTGCC GTCGTCGCCT GGTGGCGTAT
GATGGCGATC TGCCGCGGGT TGCCGATCAG TTGACCGGGG TGCAGGTGGC GTATGTGTTC
GATGGTGCGC TTCGTCAGGC GGTGCACCAG CTCAAATACC GCAGCCGGCA ACGTATGGCG
CGTCCGCTCG GCGCACTGCT GGCAGACCAT CTGCGCGCGC ATCCGCTCCC CTGTGATGCA
CTCATCCCTG TGCCGCTCCA CCCGCACCGT CTGGCGGAAC GTGGGTTCAA TCAGGCGGAA
CTGCTGGCGC GTGAAGTCGC CGGGGTGACA GGTCTGCCGG TCATTGTGGG ACCGCTGGTG
CGGATCAGAG CGACCAGGCA GCAGGCGCTG CTCGACACGC CCGGTCGTAT CGAGAATGTC
GCCGGTGCAT TCGTGTGGCA AGGTCCGCCG CCGCCAGCGC GCGTCGTGCT GGTTGACGAC
GTGCTCACCA CCGGAGCGAC GGTCAATGCC TGTGCGCAGG CGCTGCGTGC AGGCGGCGCG
CGCGACGTGT ATGCGCTGGC GCTGGCGCGG AGCCGCCGCA GCACATAG
 
Protein sequence
MMLFRWIDHL LSLLLPDRCV GCGQLGALLC DACRRRLVAY DGDLPRVADQ LTGVQVAYVF 
DGALRQAVHQ LKYRSRQRMA RPLGALLADH LRAHPLPCDA LIPVPLHPHR LAERGFNQAE
LLAREVAGVT GLPVIVGPLV RIRATRQQAL LDTPGRIENV AGAFVWQGPP PPARVVLVDD
VLTTGATVNA CAQALRAGGA RDVYALALAR SRRST