Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_1865 |
Symbol | |
ID | 5208825 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 2307164 |
End bp | 2308657 |
Gene Length | 1494 bp |
Protein Length | 497 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640595473 |
Product | CRISPR-associated Cst1 family protein |
Protein accession | YP_001276204 |
Protein GI | 148655999 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01908] CRISPR-associated CXXC_CXXC protein Cst1 |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.858378 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCACCT ATACCGGACA TCCATTCGTC GATACGGGGT TTGCCGTGAT CACCGCTTTT GTGCGTAAAC GGCGCTTTGC CGATCTCGCC GACGACGATT TTCAGCAGAT CGCCGACTAT ATCGAAGCGA ACTATGTGCG ACAGCCCCTG CGCAGCTTTT TGACCGTGGC GTTTACCAGT AATGCATGGT TCGCGCAATC GGCGTTCAAT CCCGACCGGC CCGACCTGTC GCCGGAAAAA CAGACTGAAG CGCGTGAGAA GCGCCAGTAC TGGGCGGATC GGCATTTGCG CCAGTGGCAG CAGAGCGCTG CTGCGCTCGA AACCTGCCTT TTCACCGGAT TACCGGCGGC AGGTCTTGAA TTGTCGCAGA AGTTGCAACC GGGACGGGTA GGGCGGGCGC AAATGCCATT GCTTCAGGGT GATGATGCGA TCAACTTCTT TATCAATGGC GACCCTGGTT TGCCGATGGC GGCGGAAGCG ATTCTGGCAC TCCAGGCGAT GCCTCTGGGA TGCGCTAAAG TCGGTGGGGG CTTGCTCGCC GTGCACTGCG ATGATGAGGC GTTGACGATC GCCTTCGCAA CACGCTTCTT GCAGCGCAAT CTCAACGATG TGGCGAAAGC GCAGGCTGCC GGCGAAAAGA AACTGCCCGG TTCGCCGCGC AGTCTGAAGA CGCTGCTGGT TGAGACATTG ACCGAGATTC TGATTCGGCA GATTCAGGAA GAGGAGCGAC GCGCACGGCG TCCGGCGATC ACGGCCTACT ATTTCAACAA TGGTCAGTCG CCGTTTCTTG AAATCTACCA TCTGCCGCTC CAGATTACCG GTTTTCTCCT GGCAGTGCAT ACCCCTGCCT ACCGCGCGAT CTGGAATGAA CTGGTGCAAC GTGGCTGGCA GCGCGCAGGA ATATCAGGCA AGCAGGGGAA GGCAGTCGAT CCGGTTGAAC CACATTTCAA CTATCTGTAC GAAGACCTTT TTACCCTGCC GGCGCAGGCG GCGCGGTTCG TGCGCACCTA TTTTCTGCGC ATTCCCGATC TTCGTCGCTC AGCGGACGAT CCGCGGCGCG AGTATTCGCC GCGCCGCGAA GCCGATCTGG TTTCATGGCC GCTCGTTGAA CTCTTTGCAC AGGAGGTATT GCTCATGACC GATGACCGGG TAACGAAATT GAAGGAGTTG GGCGATAAAC TGGCTGATTA CACCCGTTAT CAGGGAGGTA AGCGTTTTTT TCGCCAGTTC TTTGTCGAGC AGCGAAGTGA TAACTTTCTC AGCCTGCTGA ACAAAGCCAA TATCGACTAC ACGCGCTACA AGCGTGGTCA GGAGACATTG TTCGATCTCG ATAGTTTTCT GACCATTTTT ATGGAGGGCG ATGAGGTCTT GCGCAAGGAC TGGCGCCTGA TGCGAGATCT GGTGCTCATT CGTATGGTCG AACAGTTGCG CGACTGGATC GCCGGCAACC CTGATGCCAT TCCAGCCGAA GAAGAAGTTG CAGCAAACGA ATAG
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Protein sequence | MITYTGHPFV DTGFAVITAF VRKRRFADLA DDDFQQIADY IEANYVRQPL RSFLTVAFTS NAWFAQSAFN PDRPDLSPEK QTEAREKRQY WADRHLRQWQ QSAAALETCL FTGLPAAGLE LSQKLQPGRV GRAQMPLLQG DDAINFFING DPGLPMAAEA ILALQAMPLG CAKVGGGLLA VHCDDEALTI AFATRFLQRN LNDVAKAQAA GEKKLPGSPR SLKTLLVETL TEILIRQIQE EERRARRPAI TAYYFNNGQS PFLEIYHLPL QITGFLLAVH TPAYRAIWNE LVQRGWQRAG ISGKQGKAVD PVEPHFNYLY EDLFTLPAQA ARFVRTYFLR IPDLRRSADD PRREYSPRRE ADLVSWPLVE LFAQEVLLMT DDRVTKLKEL GDKLADYTRY QGGKRFFRQF FVEQRSDNFL SLLNKANIDY TRYKRGQETL FDLDSFLTIF MEGDEVLRKD WRLMRDLVLI RMVEQLRDWI AGNPDAIPAE EEVAANE
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