| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_1852 |
|---|
| Symbol | |
|---|
| ID | 5208812 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | - |
|---|
| Start bp | 2287679 |
|---|
| End bp | 2288791 |
|---|
| Gene Length | 1113 bp |
|---|
| Protein Length | 370 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640595460 |
|---|
| Product | nucleotidyl transferase |
|---|
| Protein accession | YP_001276191 |
|---|
| Protein GI | 148655986 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGCAG TCATTCTGGT TGGCGGGCTT GGCACCCGTT TGCGACCGCT CACGTGCAAC
ACACCCAAGC CGATGATCCC GGTGGTCAAT CAACCGTTCA TCGTCCACGT CCTGGAAAAT
CTGCGCAATC AGGGGATTGA AGAGGTCATC CTGTGCGTGC AGTACCTCGC CGGGCGGTTC
CGTGAGGCGC TTGGCGATGG TTCGGCGCTT GGTCTGAGGA TCCACGTGAT CGAAGAACCG
GAGCCGCTGG GGACTGCTGG CGCAGTGAAG AATATCGAAC ACATGCTCGA TGGATCGACC
TTCGTCTTCA ACGGCGATGT GCTGACCGAC CTCGACCTGC AGGCGATGAT GGCGTTCCAC
CGCGAGCGCG GCAGCAAGTT GACCATTGCG CTGACACCGG TCGAAGACCC GACGGCGTAT
GGTCTGGTCG AAATGGACGA AACGGGACAC ATCCGCCGGT TTACCGAAAA ACCGCGCGTC
GATGAAGTGA CCTCGAACCT GATCAACGCT GGCACCTACA TCATCGAGCC GGAACTGTTC
CGCTATGTGC CACCCAAACA ACACTACATG TTCGAGCGCG GGTTGTTCCC TGTCGTCCTC
CAGACCCGCG ATCCCATGTA CGGCTACCCG TCGTCCGCCT ACTGGACCGA CATCGGCACA
CCGTCGGCAT ATCTGGAGGT GCACCACGAC ATCCTGGTCG GCAAGGTGCG TTACCGCTTT
CACGGCAAAG AGATCGGCAA CCGGGTATGG CTGGTCGGCG ATGCCGACAT TCACCCGCGC
GCCCAGATCA TCGGTCCTGT CGTCATCGGT CCGGGAGTGA AGATCAGCGC TGGCGCGCAG
ATCATCGGAC CGACCGTTAT CGGTGCAGGA TGCATCATCG GCGCGAATGC GCGGATCGAG
GGTGCCGTCC TGTGGGAAGA AAACCAGATC GAAGAAGGGG TCGCGTTGCG GTCGTGCGTT
GTTGGCAGTC GCAATCAGAT CGGCGCGCGC ACCCACATCA GCGACGGCGC AGTCGTCAGT
GATGCGTGCA CTATCGAAGC CGACAATCGC CTGGAGCGCG GCATCCGCGT CTGGCCCGAA
ACCCATCTGA AAGAGCGCTC GATCTCCTTC TGA
|
|---|
| Protein sequence | MKAVILVGGL GTRLRPLTCN TPKPMIPVVN QPFIVHVLEN LRNQGIEEVI LCVQYLAGRF
REALGDGSAL GLRIHVIEEP EPLGTAGAVK NIEHMLDGST FVFNGDVLTD LDLQAMMAFH
RERGSKLTIA LTPVEDPTAY GLVEMDETGH IRRFTEKPRV DEVTSNLINA GTYIIEPELF
RYVPPKQHYM FERGLFPVVL QTRDPMYGYP SSAYWTDIGT PSAYLEVHHD ILVGKVRYRF
HGKEIGNRVW LVGDADIHPR AQIIGPVVIG PGVKISAGAQ IIGPTVIGAG CIIGANARIE
GAVLWEENQI EEGVALRSCV VGSRNQIGAR THISDGAVVS DACTIEADNR LERGIRVWPE
THLKERSISF
|
|---|
| |