Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_1841 |
Symbol | |
ID | 5208800 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 2274777 |
End bp | 2276294 |
Gene Length | 1518 bp |
Protein Length | 505 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640595448 |
Product | hypothetical protein |
Protein accession | YP_001276180 |
Protein GI | 148655975 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.443023 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAGCGC CTGTCATCTA TGCGCGGTTG GCGGCAGCGC ATCTGCGCGG TGATCGCGGT CTGATCGTGA TCATGGCGTT GTTTGTGCTG CTGCTGCCTC TGGCGACGCC TCGGGTCTAT GCGACCGATG AGGTGCAGTA CTACGTCTAT CTGCGCTCGC TCCGCTTCGA TGGCGATCTC GATTTCGCCA ACGATTATCA ACGCTTCGCT GAACTGAACC CGCGTTCAGG CATCGAGGGG AGCCTGCTTC AACCCAACCG CATCCGTCCG AAAACCGGTC GGTATGGCAA TATCGCTCCG GTTGGCGCTG CGATCATGTG GGCGCCGTTC TTTTTGCTGG CGGATGCGCT GGTGCGTATT GCCAATGCCT CTGGTATGCG TATTCCAGCG GATGGGTTTT CGGCGCCGTA TATCTATGCC GTCTGTTACG CTTCGGCGCT CTACGGTCTG CTGGGGGTGA TCCTCTCGTA TCGGCTGGCG CGCCGTTTTG CTTCAGGCTT TGCGGCAACC CTCGCCAGCG TCACGATCTG GCTGGCGTCG CCGCTCGTGT TCTATATGTA TGTTCAGATG CCCTTTGCGC ACGCGACAGG CCTGTTCCTG ACGGCGCTGT TCCTGACGAT CTGGTATGAA ACGCGGGAAT GGGGGCGCGA TGACGCACAA GGGCACGCTG AACGCAGCTG GCGGGCATGG CTGGCGTTGG GGTTGATTGG CGGGTTGATG ACGATCACCC GCGAGCAGTT GGGGTTGTTC CTGCTGGCGC CAGCGATCGA GGCGCTCTGG CGCTACGCGC GCCTGGTGCG ACTGCCGCGC GCTGTCGGGC GACTGGCGGT GCGTCATGCG CTCTTCGTTG GGGCGTTCGT GGTTGCGTTG ACGCCGCAAC TGATCGTGTA CCAGATTCTC AACGGTGAGC CGCGACCGGC GAGCGAGGTG AGCGGTAAGT TGAACTGGTG CAGCCCGCAT TTTCTCGATA CCCTGATTGA CGTTGATCCT GCGCCCGATT TCTGGTGCCC CGGCGCCAGT GACTTCACAG CGACCTTTCC GCCGTTCAGT CGTGGGGCGC TGGTCTGGAG TCCGGCGCTG GGGTTGGGGT TGATCGGGCT GGCGCTGCTC TGGCGGCGCG ATCGTCTGCT GACGATGGTG CTGCTGACGG CGTTTCTGGC GCAGACGTGG ATTAATGGCG CGTTTGGCAC CACGTGGCAC CTGACCGGGG CGTTTGGATT TCGTCGCCTG ATCGAGTGTA CGCCGATCTT CGTCGTTGGT CTGGCGCTGG TGAATGACTA TCTCATCAAA CGGATCGGAA GGGTAGGGGT GATCATTCCT GCCATTGTGC TGATCGGGTG GAACGCTGGG TTGGTGTTGA ATGCGACGGT CTTCAATGCC GAGACGAACC TGCGACGCGG GTTGACCTGG CCCGATGTGT GGCGCTGGCA GATGGAAGCG CCGCTCCGTG TGGTTGAGAA GGCGGGCGAT CTGCTGTTTC GGCGTTGCCG TTTTTTTGAG AACCAGCGGT GTGACTGA
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Protein sequence | MSAPVIYARL AAAHLRGDRG LIVIMALFVL LLPLATPRVY ATDEVQYYVY LRSLRFDGDL DFANDYQRFA ELNPRSGIEG SLLQPNRIRP KTGRYGNIAP VGAAIMWAPF FLLADALVRI ANASGMRIPA DGFSAPYIYA VCYASALYGL LGVILSYRLA RRFASGFAAT LASVTIWLAS PLVFYMYVQM PFAHATGLFL TALFLTIWYE TREWGRDDAQ GHAERSWRAW LALGLIGGLM TITREQLGLF LLAPAIEALW RYARLVRLPR AVGRLAVRHA LFVGAFVVAL TPQLIVYQIL NGEPRPASEV SGKLNWCSPH FLDTLIDVDP APDFWCPGAS DFTATFPPFS RGALVWSPAL GLGLIGLALL WRRDRLLTMV LLTAFLAQTW INGAFGTTWH LTGAFGFRRL IECTPIFVVG LALVNDYLIK RIGRVGVIIP AIVLIGWNAG LVLNATVFNA ETNLRRGLTW PDVWRWQMEA PLRVVEKAGD LLFRRCRFFE NQRCD
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