Gene RoseRS_1836 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_1836 
Symbol 
ID5208795 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp2266563 
End bp2267885 
Gene Length1323 bp 
Protein Length440 aa 
Translation table11 
GC content60% 
IMG OID640595443 
Producthypothetical protein 
Protein accessionYP_001276175 
Protein GI148655970 
COG category[R] General function prediction only 
COG ID[COG1721] Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.255887 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCCGA CACTGCGCCT CTATCTCATA CTCCTCGCCA GCGCTGTGCT GATCGCCGGA 
GCAGCGATCA CGCCGCTGAT GATCTGGATT GCCGTTGCGT ACCTGACGGT TGTCGCTGTG
CTGGCAAGCG CCGATTTCCT GCTCACTGAC CGTCCGACTG TCCTCGATGT CGAGCGCATT
AACGACTCGC GCCTCTCACT GGGCGCCAGT AACCCGGTGA CCATCCTCAT CGCCAGTCGC
GCCCGTCGTC GGTTGATACT CCAGATCCGT GACGAGCATC CCGATGAAAT CCCGGCTGAT
GTCACAGTTC TGAGCGGAGC AGTCGATCCG TTTGCGCTGC TTGAAGTGCG CTACCACCTG
CGCCCGCTCC GTCGCGGCGA CTATATGTTC GGCGACATCA ACCTGCGCTA TGTCAGCGCC
TTTGGCACAT TCGTGCAACA GGCGCGCTAT CCGGCTTCCG CGCCGGTGAA GGTCTATCCG
AATGTGCTGG ATATTCGCAA ATACGACCTG TTCGCACGCA AAGGGTTACT GCTCGAAATG
GGGTTACGTC CGGCGCGCAT CTTTGGGCAA GGGGTCGAGT TCGAACGGCT ACGCGAATAC
CGTCCCGACG ACGAGTTTCG TCGTATCAAC TGGAAAGCGA CCGCCCGACG GGGCAAGCCC
ATCGCTGCCG AGTATGAGAC CGAACGCAGC CAGTACGTTG TCAGCGTGAT CGATACAGGT
CGCCTCATGC GCGCGCCGGC GGATGGTAGT GCGGGAGGAC TTGCCCGGCT CGATTACGCC
ATCAACGCCA CGTTGCTGCT CTCCTACGTG GTCACCCTCA AGGGGGATCA TGCCGGTCTC
TTGACCTTTG CCGATGATGT TCGCACTTAT CTGGCGCCGA AGCGCGGCAA GAGCCAGTTC
TATCGCATGC TCGAGACGCT GTACAACGTA CCGTTCGAGC CGGTCGAATC CGACTATGCG
CGCGCACTCA CCTATCTGAG CGCCAGGCAT AAACGCCGTT CGTTGATCAT CGTCTTCACC
GATCTCGTCA CGCTCGACGC CGCACGCGAT CTGATCGCGC ACATGGCGCG TCTGGCGCGG
CGTCATCTGC CGTTGTGCGT CGTTCTGTCC GACCCGAATA TCACCCGGCT TGCCGGGCGC
GCGCCAACCG AAGCGACCGA TGTTTACCGG CGTGGTGTGG CTGAAATGCT TCTGGCAGAA
CGACGGGTTG TGCTCGAAAC CCTGCACCGC AATGGCGTCC TGACCCTTGA CGTTCCCGCC
GATCGTCTGA GCGTGGCGGT TATCGAAAAA TATCTGGAAC TTAAGGGGCG GGGGATGATC
TAA
 
Protein sequence
MIPTLRLYLI LLASAVLIAG AAITPLMIWI AVAYLTVVAV LASADFLLTD RPTVLDVERI 
NDSRLSLGAS NPVTILIASR ARRRLILQIR DEHPDEIPAD VTVLSGAVDP FALLEVRYHL
RPLRRGDYMF GDINLRYVSA FGTFVQQARY PASAPVKVYP NVLDIRKYDL FARKGLLLEM
GLRPARIFGQ GVEFERLREY RPDDEFRRIN WKATARRGKP IAAEYETERS QYVVSVIDTG
RLMRAPADGS AGGLARLDYA INATLLLSYV VTLKGDHAGL LTFADDVRTY LAPKRGKSQF
YRMLETLYNV PFEPVESDYA RALTYLSARH KRRSLIIVFT DLVTLDAARD LIAHMARLAR
RHLPLCVVLS DPNITRLAGR APTEATDVYR RGVAEMLLAE RRVVLETLHR NGVLTLDVPA
DRLSVAVIEK YLELKGRGMI