Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_1836 |
Symbol | |
ID | 5208795 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 2266563 |
End bp | 2267885 |
Gene Length | 1323 bp |
Protein Length | 440 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640595443 |
Product | hypothetical protein |
Protein accession | YP_001276175 |
Protein GI | 148655970 |
COG category | [R] General function prediction only |
COG ID | [COG1721] Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.255887 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCCCGA CACTGCGCCT CTATCTCATA CTCCTCGCCA GCGCTGTGCT GATCGCCGGA GCAGCGATCA CGCCGCTGAT GATCTGGATT GCCGTTGCGT ACCTGACGGT TGTCGCTGTG CTGGCAAGCG CCGATTTCCT GCTCACTGAC CGTCCGACTG TCCTCGATGT CGAGCGCATT AACGACTCGC GCCTCTCACT GGGCGCCAGT AACCCGGTGA CCATCCTCAT CGCCAGTCGC GCCCGTCGTC GGTTGATACT CCAGATCCGT GACGAGCATC CCGATGAAAT CCCGGCTGAT GTCACAGTTC TGAGCGGAGC AGTCGATCCG TTTGCGCTGC TTGAAGTGCG CTACCACCTG CGCCCGCTCC GTCGCGGCGA CTATATGTTC GGCGACATCA ACCTGCGCTA TGTCAGCGCC TTTGGCACAT TCGTGCAACA GGCGCGCTAT CCGGCTTCCG CGCCGGTGAA GGTCTATCCG AATGTGCTGG ATATTCGCAA ATACGACCTG TTCGCACGCA AAGGGTTACT GCTCGAAATG GGGTTACGTC CGGCGCGCAT CTTTGGGCAA GGGGTCGAGT TCGAACGGCT ACGCGAATAC CGTCCCGACG ACGAGTTTCG TCGTATCAAC TGGAAAGCGA CCGCCCGACG GGGCAAGCCC ATCGCTGCCG AGTATGAGAC CGAACGCAGC CAGTACGTTG TCAGCGTGAT CGATACAGGT CGCCTCATGC GCGCGCCGGC GGATGGTAGT GCGGGAGGAC TTGCCCGGCT CGATTACGCC ATCAACGCCA CGTTGCTGCT CTCCTACGTG GTCACCCTCA AGGGGGATCA TGCCGGTCTC TTGACCTTTG CCGATGATGT TCGCACTTAT CTGGCGCCGA AGCGCGGCAA GAGCCAGTTC TATCGCATGC TCGAGACGCT GTACAACGTA CCGTTCGAGC CGGTCGAATC CGACTATGCG CGCGCACTCA CCTATCTGAG CGCCAGGCAT AAACGCCGTT CGTTGATCAT CGTCTTCACC GATCTCGTCA CGCTCGACGC CGCACGCGAT CTGATCGCGC ACATGGCGCG TCTGGCGCGG CGTCATCTGC CGTTGTGCGT CGTTCTGTCC GACCCGAATA TCACCCGGCT TGCCGGGCGC GCGCCAACCG AAGCGACCGA TGTTTACCGG CGTGGTGTGG CTGAAATGCT TCTGGCAGAA CGACGGGTTG TGCTCGAAAC CCTGCACCGC AATGGCGTCC TGACCCTTGA CGTTCCCGCC GATCGTCTGA GCGTGGCGGT TATCGAAAAA TATCTGGAAC TTAAGGGGCG GGGGATGATC TAA
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Protein sequence | MIPTLRLYLI LLASAVLIAG AAITPLMIWI AVAYLTVVAV LASADFLLTD RPTVLDVERI NDSRLSLGAS NPVTILIASR ARRRLILQIR DEHPDEIPAD VTVLSGAVDP FALLEVRYHL RPLRRGDYMF GDINLRYVSA FGTFVQQARY PASAPVKVYP NVLDIRKYDL FARKGLLLEM GLRPARIFGQ GVEFERLREY RPDDEFRRIN WKATARRGKP IAAEYETERS QYVVSVIDTG RLMRAPADGS AGGLARLDYA INATLLLSYV VTLKGDHAGL LTFADDVRTY LAPKRGKSQF YRMLETLYNV PFEPVESDYA RALTYLSARH KRRSLIIVFT DLVTLDAARD LIAHMARLAR RHLPLCVVLS DPNITRLAGR APTEATDVYR RGVAEMLLAE RRVVLETLHR NGVLTLDVPA DRLSVAVIEK YLELKGRGMI
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