| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_1829 |
|---|
| Symbol | |
|---|
| ID | 5208788 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | - |
|---|
| Start bp | 2257901 |
|---|
| End bp | 2259019 |
|---|
| Gene Length | 1119 bp |
|---|
| Protein Length | 372 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640595436 |
|---|
| Product | 6-phosphofructokinase |
|---|
| Protein accession | YP_001276168 |
|---|
| Protein GI | 148655963 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0205] 6-phosphofructokinase |
|---|
| TIGRFAM ID | [TIGR02483] phosphofructokinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.975855 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGATCC CTTCGACCTC ACGATTGCGC ATTGCCATCT GCACTGGCGG CGGTGATGCT
CCGGGGCTCA ACGCCGTTAT CCGCGCGGTT GTGCTGAGTG CGCTTCACCG CGGCTGGGAA
TGCTATGGCA TCCGCGATGG CTTCAACGGC ATTCTCTCAC CGAAAGAATA TCCACGGGGC
GGCGTGATCC CGCTGACCCG CGAAACGGTG CGCGGCATTA CACCCCTGGG CGGCACGATC
ATCGGAACAA CGAATCGTGG GAATCCCCTG CGCTATCCTA CAAAACTGCC TGACGGCGCC
GTGATCGAGC GCGACCGCAC CGACGAGATT GTGAATGGTC TCGCAGTCTA CGGTATCGAT
GCCCTGATCT CGGTCGGCGG CGACGGCTCG ATGGAGATCG CAGCGGCGCT GGCACGTAAA
GGGGTGCGCG TGATCGGCGT CCCCAAAACG ATCGACAACG ACCTGGACGG AACGGTGGCG
ACCTTCGGGT TCGATACGGC GGTCGCCTTT GCGACGGAAG CGATCGATCG CCTGCACACA
ACCGCCGAAG CGCACCAGCG AGTCATGGTA GTTGAGGTCA TGGGGCGTTA TGCGGGATGG
ATTGCGCTCA ACGCCGGGGT TTCCGGAACG GCGAATGTTA TCCTTATTCC CGAAATTCCC
TACGACATCC ATAAGGTTGC CGCTAAGATC AAAAGCCGTG AAGCCGAAGG GCGACCATAC
TCGATCGTCG TCGTCGCTGA AGGCGCCCGT CCGATTGAAG GCAGCGTCTC GCTGATTGCC
CCTAGAGAAG CCGGTCGCGC CGAGCGTCTG GGAGGCATCG GCGAACGAGT GGCGCGTGAG
ATCGAGGCGC TGACCGGCAA AGAAACGCGC GTTGTCGTTC TGGGGCACCT GCTGCGCGGC
GGCACGCCAA CCACATTCGA CCGCCTGCTG GCGCTGCGCT TCGGCGCCGC TGCCGTGCGC
GCGCTCGAAG AGGGGCAGTC TGGCGTGATG GTGGCGCTCG ACCCGCCGAC GGTGCGGTAT
GTGCCGCTCG AAGAAGCGAC CCGGCGTATG AAAACCGTTC CGCTCGACTC GGATACCATG
CTGACAGCGC GCGATCTGGG GATTGTCTTC GGCGACTGA
|
|---|
| Protein sequence | MTIPSTSRLR IAICTGGGDA PGLNAVIRAV VLSALHRGWE CYGIRDGFNG ILSPKEYPRG
GVIPLTRETV RGITPLGGTI IGTTNRGNPL RYPTKLPDGA VIERDRTDEI VNGLAVYGID
ALISVGGDGS MEIAAALARK GVRVIGVPKT IDNDLDGTVA TFGFDTAVAF ATEAIDRLHT
TAEAHQRVMV VEVMGRYAGW IALNAGVSGT ANVILIPEIP YDIHKVAAKI KSREAEGRPY
SIVVVAEGAR PIEGSVSLIA PREAGRAERL GGIGERVARE IEALTGKETR VVVLGHLLRG
GTPTTFDRLL ALRFGAAAVR ALEEGQSGVM VALDPPTVRY VPLEEATRRM KTVPLDSDTM
LTARDLGIVF GD
|
|---|
| |