Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_1825 |
Symbol | |
ID | 5208784 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 2253352 |
End bp | 2254083 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640595432 |
Product | alpha/beta hydrolase fold |
Protein accession | YP_001276164 |
Protein GI | 148655959 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.388616 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.284005 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACTGCGC TCACTCTGCG CGCCATTCCT GCAACCAGGC GCGCATCCGC GCTCTACTGC GCAACCGGCG GCAGCGGGTT TCCGCTACTG TTCATCCATG GCTTTGGCGC CTGTGGTGAT GTGTTTCAAC CGCTCGCCAG CAAACTTGCC AGCCGGTATC AGACCATCGT GCCAGACCTG CGCGGGCATG GTCGGAGTCG TCGATTGCCG CTCGCCGATA GCATCGAGCG TCTGGCAGCT GATGTGTGCG ATCTGCTCGA TCTGCTCGGC GTGTCGCGCA CCGTCATTAT CGGTCATGCA GGCGGAACGG CGGTTGCCGC CCACCTCGCC GCCGACCAGC CGACGCGCGT GTCCGGGCTG GTGCTGATCT CGCCACCTGA GATCCTGCCG TGTGGACGGC GGTCTCTCGG CGCGCGCCTG CGCGATGGGT TGAGCGCAGC GTTCAGCCGC TCAACCAGTG CTGGCGACCA CGACGCACAG GCATGCCAGC GTCTGCTCCA GCATACCGAT TACCGCACGC AACTGCGCTC GATAACCGCG CCAACGCTCA TCATCGCCGG GGATCGCGAC CCCGCCCCGA TCCTGCGTCA GGCGCACGAG ATAGCGCAGA CCATTGGACA TGGCACACCG GCGATCGTCA GTGGAGGAGG CGTCAGCCTG CTGCACACCC ACGCAGACGC ACTGATCGAC GTGCTGACGC CATGGCTCGA TCAGCAGGAG TGCGCCGCAT GA
|
Protein sequence | MTALTLRAIP ATRRASALYC ATGGSGFPLL FIHGFGACGD VFQPLASKLA SRYQTIVPDL RGHGRSRRLP LADSIERLAA DVCDLLDLLG VSRTVIIGHA GGTAVAAHLA ADQPTRVSGL VLISPPEILP CGRRSLGARL RDGLSAAFSR STSAGDHDAQ ACQRLLQHTD YRTQLRSITA PTLIIAGDRD PAPILRQAHE IAQTIGHGTP AIVSGGGVSL LHTHADALID VLTPWLDQQE CAA
|
| |