Gene RoseRS_1825 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_1825 
Symbol 
ID5208784 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp2253352 
End bp2254083 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content65% 
IMG OID640595432 
Productalpha/beta hydrolase fold 
Protein accessionYP_001276164 
Protein GI148655959 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.388616 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.284005 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGCGC TCACTCTGCG CGCCATTCCT GCAACCAGGC GCGCATCCGC GCTCTACTGC 
GCAACCGGCG GCAGCGGGTT TCCGCTACTG TTCATCCATG GCTTTGGCGC CTGTGGTGAT
GTGTTTCAAC CGCTCGCCAG CAAACTTGCC AGCCGGTATC AGACCATCGT GCCAGACCTG
CGCGGGCATG GTCGGAGTCG TCGATTGCCG CTCGCCGATA GCATCGAGCG TCTGGCAGCT
GATGTGTGCG ATCTGCTCGA TCTGCTCGGC GTGTCGCGCA CCGTCATTAT CGGTCATGCA
GGCGGAACGG CGGTTGCCGC CCACCTCGCC GCCGACCAGC CGACGCGCGT GTCCGGGCTG
GTGCTGATCT CGCCACCTGA GATCCTGCCG TGTGGACGGC GGTCTCTCGG CGCGCGCCTG
CGCGATGGGT TGAGCGCAGC GTTCAGCCGC TCAACCAGTG CTGGCGACCA CGACGCACAG
GCATGCCAGC GTCTGCTCCA GCATACCGAT TACCGCACGC AACTGCGCTC GATAACCGCG
CCAACGCTCA TCATCGCCGG GGATCGCGAC CCCGCCCCGA TCCTGCGTCA GGCGCACGAG
ATAGCGCAGA CCATTGGACA TGGCACACCG GCGATCGTCA GTGGAGGAGG CGTCAGCCTG
CTGCACACCC ACGCAGACGC ACTGATCGAC GTGCTGACGC CATGGCTCGA TCAGCAGGAG
TGCGCCGCAT GA
 
Protein sequence
MTALTLRAIP ATRRASALYC ATGGSGFPLL FIHGFGACGD VFQPLASKLA SRYQTIVPDL 
RGHGRSRRLP LADSIERLAA DVCDLLDLLG VSRTVIIGHA GGTAVAAHLA ADQPTRVSGL
VLISPPEILP CGRRSLGARL RDGLSAAFSR STSAGDHDAQ ACQRLLQHTD YRTQLRSITA
PTLIIAGDRD PAPILRQAHE IAQTIGHGTP AIVSGGGVSL LHTHADALID VLTPWLDQQE
CAA