Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_1823 |
Symbol | |
ID | 5208782 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 2249237 |
End bp | 2251828 |
Gene Length | 2592 bp |
Protein Length | 863 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640595431 |
Product | FHA domain-containing protein |
Protein accession | YP_001276163 |
Protein GI | 148655958 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1716] FOG: FHA domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.997566 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.104099 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTCCAC ACCTTGCCAG CGTTCGCGGC CCCCTGATCG GACGCACTTT CGCTCTGGGA GACCAGCCGC TCACCATCGG GCGTGCAGCA GATAATGCCG TGGTGATCGC CAGTCCGCGC GCCTCGCGCC ACCACGCCCA TATTCGACGT GAAGGCGCGG CTTTCGTCAT CTACGACCTG GGCAGCGCCA ACGGCACGCT CGTCAACGGG CAGCGGGTGC AACGCGCCGT TCTGCAGCCC GGCGACCTGA TCGATATCGG TGATGAAGTC TTTCGCTTCG AGGCGGGACA CCAGCAAGAC GCCACCCTGC TGAGTGCGCC GCAGGCGCAG CCGCCCGCCT ACCCGTCACA ACCGCCGACG GCGCCTGCCT ACCCGCCGCA GACGCCCCCC CCTGCCTACT CGCCGCCGCC AGCGCCTGCC GCCTACCCGC CGCAGGCGCA GCAGCCCGCC TACTCGCCGC CGCAGGCGCC GCCTGCCTAC CCGCCGCAGG CGCAGCCCCC CGCCTACCCG CCACAACCGC AGGCGCAGCC GCAGATGCGT CCTCCGGCGC CGCCCTATCC GCCCCAGAGC GCAGCGCCAT CATATCCCCA GCAGACCCCG GCGCAGGGGT ATCCAGGGTA CGGTCCGCCC GCCGGTCACC CCTCCATGTA TGCGCCGCCG CCGCCCCGGA CGAAAAGCAG CGGACGGTCC TGCCTGCTGG TGATCATCAT CCTGCTAGCG CTGGTCTGTG TGGCAGGCGT GGCAGGCGCC TTCGTCTTCC GCGATCGCCT GCGCGACATT CCGGGGGTCA GCGATCTGCC GGGCATCGGC GGCAATCCGT CGGGCATCGC TCCTCCGCCG GTGCATACCG GCAGCGCAAC CGTCGGCAGC GGTCAGGCCG CCGCGATCTC GATGCCCAAC GGACCGATGA TCGAAGTGCC GCACGGCGCC GTGCCGCCCA ACCCCGACGG CACGCCTGGC ACGCTCACCT TCTCGGTCGC CCCCGCACCG GATCAACCGG TCAGTCTACC CGATGAGATG GCGCTCAGCG GATCGCTCTA TCAGTTCGAG CCGGAAGGGG TGACCTTCGC CGTGCCGGTG CGCATCACGC TCCCGATCCC CGCCGGAACC GACCCGGCGC GGGTGATGGG GCTGGTCACG CGCGACGCCC AGAGCGGCGA ATGGGTCACG ATTGCGGGCA CAGTTGACGC TGCTGCGCGT ACCGTGAGCG CGGAAGTGAC CCACTTCTCG CCCTACGGCG TGTACAGTTA CACCGGCAGC GATCCGGGCG CCTGGCAGCG CAAAAATGGC GGCTGGTTCG TCCTCGAACA TCCTGGAGTT CGGGGCGACA GTCCCTATCC GATGTGTAGA CAACAGCCGC GCTCGCTGTA CCTCAACGTC TGCATCCAGA GCGCGACATT GGCCGACCCA GGACTCGCCT ATCTGCTGCC GCCCGATAAT CTCCTTGCGA TTGGACAGCG TTATGGTAGC GACCGACCGT TCGACCCGCT GAAAGTCTGG CTGCCTGCCG GAACCTACCG GGTAGTCCAC TACATCTTTA TGAGCGAGAT CAACAACGAC CCGCTCTATG TGCCGTGCCG GGGATGGTGG GTGAAACCGC CGCAGGTCAT CAACCTTCAA GCGGGGCAAA CCATCACGTT TGAGCGCTTC GCACCCGAAG ATGGCGTGTA TATGGACTCG TTCGACCCAG GCACGTGCAC CGGCACGCCT GCGTCGCCGC CGGGAGTAAC CCAGCCGCCG CATCAACCAC CGGCTGACAC CGGTCTCTGC CTGGCGAAAA TGAACGGCGA GTGGAATGCC CGCCTGACGC TGCGCTCTAC CAACGATCCA GATTCCCAGG ATGAGATCGG CGATGTAGAA GAGGCAATTT TCGCGTTTCA GATCAACGGC ACGGAAGCGC TGGTTCAACT CGTCGACCCA GGCGGGGAAC GGAGCGATTT TGCCCGCGGT ACATGCAGTG TGCAGAATGG ACGCTACGTG ATTGACCTGT CACAAACAGA CGCGAATGCA GCCATGGTGT TCACGCTTCA ATTCAGCGGC GACGACCGGA TGACCGGCGA TCTCAAGGTT TCTGAGGGTG ATATGTACCT GATTGCCGAC GCTGAATTGA CCCGTCGGGC GGGATCGGGT CAGTCGCCTC CCAGTGATCA GCCTTCGACC TTCACCGACA GTTGCCCGGC GATGACCGGC AATTGGGACA TGACGATGAA CCTCGTTTCA TCGACCAATC CCAACGTTCC GACCGGCGGG ACCAGACAGG GGGTGCTGAG TCTGCGCGTT GAGAATGAGA AAGTGTATGC ACAATGGACG GAGGGCGGTC GGCGAAGCCA GACTGCCGGG GGCACATGCA CGGCGCAGGG CGATAAGCGT TACCAGATTG TTCTGCAGGA ACAGATGCCC GAACTGCACC CGCCGCAGGT GCAGCCGCCA CCCTCCGATC CAAACCAGGC GCCTCAGGTG CCGCTCGAAG AATTACTTTT CCCAATCACG TTCGATGTTC AGTTCGAGAA CCAGAACCGT ATGAGCGGCA ATCTCACCGT CCTGGCGTAC AACCACAAGT ACGCGAGCAG TATCGTCATG TCGCGGCGTT AG
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Protein sequence | MPPHLASVRG PLIGRTFALG DQPLTIGRAA DNAVVIASPR ASRHHAHIRR EGAAFVIYDL GSANGTLVNG QRVQRAVLQP GDLIDIGDEV FRFEAGHQQD ATLLSAPQAQ PPAYPSQPPT APAYPPQTPP PAYSPPPAPA AYPPQAQQPA YSPPQAPPAY PPQAQPPAYP PQPQAQPQMR PPAPPYPPQS AAPSYPQQTP AQGYPGYGPP AGHPSMYAPP PPRTKSSGRS CLLVIIILLA LVCVAGVAGA FVFRDRLRDI PGVSDLPGIG GNPSGIAPPP VHTGSATVGS GQAAAISMPN GPMIEVPHGA VPPNPDGTPG TLTFSVAPAP DQPVSLPDEM ALSGSLYQFE PEGVTFAVPV RITLPIPAGT DPARVMGLVT RDAQSGEWVT IAGTVDAAAR TVSAEVTHFS PYGVYSYTGS DPGAWQRKNG GWFVLEHPGV RGDSPYPMCR QQPRSLYLNV CIQSATLADP GLAYLLPPDN LLAIGQRYGS DRPFDPLKVW LPAGTYRVVH YIFMSEINND PLYVPCRGWW VKPPQVINLQ AGQTITFERF APEDGVYMDS FDPGTCTGTP ASPPGVTQPP HQPPADTGLC LAKMNGEWNA RLTLRSTNDP DSQDEIGDVE EAIFAFQING TEALVQLVDP GGERSDFARG TCSVQNGRYV IDLSQTDANA AMVFTLQFSG DDRMTGDLKV SEGDMYLIAD AELTRRAGSG QSPPSDQPST FTDSCPAMTG NWDMTMNLVS STNPNVPTGG TRQGVLSLRV ENEKVYAQWT EGGRRSQTAG GTCTAQGDKR YQIVLQEQMP ELHPPQVQPP PSDPNQAPQV PLEELLFPIT FDVQFENQNR MSGNLTVLAY NHKYASSIVM SRR
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