Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_1821 |
Symbol | |
ID | 5208780 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 2247426 |
End bp | 2247923 |
Gene Length | 498 bp |
Protein Length | 165 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640595429 |
Product | phosphoribosylaminoimidazole carboxylase, catalytic subunit |
Protein accession | YP_001276161 |
Protein GI | 148655956 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0041] Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase |
TIGRFAM ID | [TIGR01162] phosphoribosylaminoimidazole carboxylase, PurE protein |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0314014 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAACCGC TGGTCGGCAT CATTATGGGA TCACAATCGG ATTGGGAAAC GATGCGTCAT GCAGCGCAAA CGCTGGAAGA GTTGCACGTC CCTTTCGAGA CGCGCATCGT CTCGGCGCAC CGCACGCCCG ATCTGCTCTT CGAGTATGCT GCAGGCGCCG AAGAACGCGG CATCGAGGTC ATTATTGCGG GCGCTGGCGG CGCAGCGCAC CTCCCCGGCA TGACCGCCGC CAAAACGGTT CTGCCTGTGC TCGGCGTGCC GGTCGAGTCG CATGCCCTTC ACGGGCTGGA CTCGCTCCTT TCGATTGTTC AGATGCCGGC AGGCGTGCCG GTCGGGACAC TGGCGATCGG ACGGGCGGGG GCGATCAATG CTGCGCTCCT CGCTACGGCA ATCCTTGGCA ACCGATACCC GCATATCCGC GATGCGCTGC GACAGTTCCG CGAGCAGCAG ACCCGTCGCG TGCTTCAATA CCCTGATCCA CGTGAGCAGC ACCAATGA
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Protein sequence | MQPLVGIIMG SQSDWETMRH AAQTLEELHV PFETRIVSAH RTPDLLFEYA AGAEERGIEV IIAGAGGAAH LPGMTAAKTV LPVLGVPVES HALHGLDSLL SIVQMPAGVP VGTLAIGRAG AINAALLATA ILGNRYPHIR DALRQFREQQ TRRVLQYPDP REQHQ
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