Gene RoseRS_1821 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_1821 
Symbol 
ID5208780 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp2247426 
End bp2247923 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content63% 
IMG OID640595429 
Productphosphoribosylaminoimidazole carboxylase, catalytic subunit 
Protein accessionYP_001276161 
Protein GI148655956 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0041] Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase 
TIGRFAM ID[TIGR01162] phosphoribosylaminoimidazole carboxylase, PurE protein 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0314014 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACCGC TGGTCGGCAT CATTATGGGA TCACAATCGG ATTGGGAAAC GATGCGTCAT 
GCAGCGCAAA CGCTGGAAGA GTTGCACGTC CCTTTCGAGA CGCGCATCGT CTCGGCGCAC
CGCACGCCCG ATCTGCTCTT CGAGTATGCT GCAGGCGCCG AAGAACGCGG CATCGAGGTC
ATTATTGCGG GCGCTGGCGG CGCAGCGCAC CTCCCCGGCA TGACCGCCGC CAAAACGGTT
CTGCCTGTGC TCGGCGTGCC GGTCGAGTCG CATGCCCTTC ACGGGCTGGA CTCGCTCCTT
TCGATTGTTC AGATGCCGGC AGGCGTGCCG GTCGGGACAC TGGCGATCGG ACGGGCGGGG
GCGATCAATG CTGCGCTCCT CGCTACGGCA ATCCTTGGCA ACCGATACCC GCATATCCGC
GATGCGCTGC GACAGTTCCG CGAGCAGCAG ACCCGTCGCG TGCTTCAATA CCCTGATCCA
CGTGAGCAGC ACCAATGA
 
Protein sequence
MQPLVGIIMG SQSDWETMRH AAQTLEELHV PFETRIVSAH RTPDLLFEYA AGAEERGIEV 
IIAGAGGAAH LPGMTAAKTV LPVLGVPVES HALHGLDSLL SIVQMPAGVP VGTLAIGRAG
AINAALLATA ILGNRYPHIR DALRQFREQQ TRRVLQYPDP REQHQ