| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_1819 |
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| Symbol | |
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| ID | 5208778 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 2244593 |
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| End bp | 2246308 |
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| Gene Length | 1716 bp |
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| Protein Length | 571 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640595427 |
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| Product | signal peptide peptidase SppA, 36K type |
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| Protein accession | YP_001276159 |
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| Protein GI | 148655954 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
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| TIGRFAM ID | [TIGR00705] signal peptide peptidase SppA, 67K type
[TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0408737 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGAGCG TCTTCTTCAT CTGGTTCATC AACCTGACGC GGCGCACCCG TAATCTCTGG
CGTCGATTAT TACGGCGCCG CGTGGCGTAT GTACGCCTGT CAATCGGTGG GGCGCTCCCG
GAATTCGCGC TGCCGCCACC CTGGTGGGCG CGGCGATTCC TGGGCGCCTC GATGCCGTTG
AGCATGAGTA ATCTGCGCCA TCGTCTCGAA TGGCTCGCCT CCGACCCGCA GGTACGCGGA
ATCGTGCTCG ACATCAACAC GCTGACCTGT GGATGGGCGA CGATTGAGAG CCTGCATCAG
GAGATCCGGC GCTTTCGCGA ACGCGGCAAA CGGGTTGTGG CGCGTCTGAC GAATCCTGAT
ACGAAAACGT ATGTCGCCGC CTGTGCCGCT GATCTGATCG TTGCCCCCCC AGCAGCGCTG
CTCAACGTTA CCGGTCTGTA CACGGGGGTG CGCTTCCTCA AAGACGCGCT GGCGAAAGTG
GATCTGAGCG TCGAGGTGAC GGCGGTATCG CCGTACAAAA CAGCTGGCGA TCCGCTGGCG
CGCCCTGATA TGTCGCCGGA AAACCGCGAG CAGATCGAAC GTCTGCTCGA CCTGCGCTAC
GCTGCAATCG TCGAAACGAT TGCCACCGCA CGACGCAAGA CTCCCGATGA GGTGCGCGCG
CTGATCGATA CAGCGCCGTG GAGCGCCCAA CGAGCACAGG AAGCCGGACT CATCGACGCA
GTGCTGTATG AAGATGAACT CCCGGCATTC CTGGCGTCCC AGGCAGGGAA AGACGGCGGC
GCCGGATCGG AGCCGCAGAT CGTCGAATGG GCGCAGGCAC GGCGCGCGCT CCGCCTGCCG
ATGTTGCGCC CCCACCGCCG ACTGGTCGGC GTTATCACGA TTGAAGGAAC CATCGCCGCC
GGTCCGAGCC GTCAGAACCC GCTGCCCATC CCGTTGATCG GCGAGCTGAT TGCGGGCAGC
GAGAGCATCA TCCAGGCGTT GCGTCAGGCA GAGCGCAATC CACGCCTTGC CGCAGTCCTG
CTGTACATCA ACTCACCGGG TGGCAGCGCC TTCGACTCCG ACCTGATCTG GCGCGAAGTG
CGTCGTCTCG ACCGCCGCAA GCCGGTTGTG GCGGTCATGG GCGATGTTGC CGCTTCGGGA
GGCTATTACG TCGCGTCCGG CGCACGCACG ATCCTGGCGC AACCCGGCGC TGTCACCGGC
AGCATTGGCG TGCTGATCAT TCGCCCGGTG ATAGAAGGGC TGCTGAAACG GGCAGGGGTA
AACACGGTTG CCATCGGGCG CGGTGCGAAC AGCGCCTTCT TCGTCAGCGA CGCGCCAGCT
GAAGCGGAAC GATCCGCCGT GCGCGCCCTG ATCGACGACA GTTACGCCCT GTTCAAACAA
CGGGTCAGCA CCGGACGCAA CATTCCAGAA CCGGCGCTCG AACCGCTGGC GGGCGGGCGG
GTCTGGAGCG GACGCGAAGC ATACGAATAC GGATTGATCG ATGCGTCCGG CGGGGTTCCG
GAAGCATTGC TGAAAGCGCA GGAACTCGCC GGATTGCCGC GCGACCGGAC GGCGCCGCTG
ATCCTGATCG GCAGTGGGCG CGGGCGCCTG CCACCCCAAT CCTTCCCCAA AGATATGATG
GAAGGGCTGA TCACGGAACT GCGACAACCG CGCGTCTGGG CAATGTTGCC GTTCAGCGAG
GATGAGAGTG TGGTACAATT GAGGGAGATC GCGTAA
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| Protein sequence | MLSVFFIWFI NLTRRTRNLW RRLLRRRVAY VRLSIGGALP EFALPPPWWA RRFLGASMPL
SMSNLRHRLE WLASDPQVRG IVLDINTLTC GWATIESLHQ EIRRFRERGK RVVARLTNPD
TKTYVAACAA DLIVAPPAAL LNVTGLYTGV RFLKDALAKV DLSVEVTAVS PYKTAGDPLA
RPDMSPENRE QIERLLDLRY AAIVETIATA RRKTPDEVRA LIDTAPWSAQ RAQEAGLIDA
VLYEDELPAF LASQAGKDGG AGSEPQIVEW AQARRALRLP MLRPHRRLVG VITIEGTIAA
GPSRQNPLPI PLIGELIAGS ESIIQALRQA ERNPRLAAVL LYINSPGGSA FDSDLIWREV
RRLDRRKPVV AVMGDVAASG GYYVASGART ILAQPGAVTG SIGVLIIRPV IEGLLKRAGV
NTVAIGRGAN SAFFVSDAPA EAERSAVRAL IDDSYALFKQ RVSTGRNIPE PALEPLAGGR
VWSGREAYEY GLIDASGGVP EALLKAQELA GLPRDRTAPL ILIGSGRGRL PPQSFPKDMM
EGLITELRQP RVWAMLPFSE DESVVQLREI A
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