Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_1818 |
Symbol | |
ID | 5208777 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 2243674 |
End bp | 2244555 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640595426 |
Product | thioredoxin |
Protein accession | YP_001276158 |
Protein GI | 148655953 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG3118] Thioredoxin domain-containing protein |
TIGRFAM ID | [TIGR01068] thioredoxin |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0314014 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGTCTCTCG TCAACAAAAG CGCGAGCGGT TCTGTCATCG ATGTCAACGA ACGCACCTTC CGCGCCGAGG TGCTCGAACG CTCACGCACG GTTCCGGTTG TCGTTGATTT CTGGGCGCCC TGGTGCGGTC CCTGCCGCGT GCTGGGTCCC ATTCTGGAAC GGCTGGCTGC CGAGGCGAAA GGCGCCTGGA TTCTGGCAAA ACTGAATGTG GACGAGAATC CGCGCCTGGC GCAGATGTTC CAGGTCCAGG GCATCCCGGC GGTCAAAGCG TTTCGCGATG GCCGGGTGGT GGACGAATTT ACCGGCGCGC TGCCCGAATC GCAGGTGCGC GCGTGGCTGA AGCGCATCAT GCCGCCGCCG CCCGCTTCGC CTGCCGACCG TCTGGCGGCG GAGGCGGCAG CGATTGAGGA GCGTGATCCG CTCGGCGCCA AAGCGCGGTA TGAAAGCGCA CTCTCGTTCG ATCCCAATCA TAGCGCCAGC CTGTTTGGGT TGGGGCGCCT GATGCTCATG GCGGGCGACC CGGCAGGCGC CGAAATGTTG AAGAAGGTTC CGTCCGACGC GCCACAGGCG AAACAGGCGC AGGCATGGCT GGCGCTCGCC GATCTGATCG CCGAAGCGGA AGAGACCAAT CCGTCAACGC TGTTGGAGCG CATTGAGCAG AATCCAGCGG ATCTCGAGGC GCGCTGGTTG CTGGCGGCGC ATCAACTGCG CGGGCAACGC TACGCCGATG CGATCCAGAC CCTGCTGGCA ATTGTTATGC GCAATCGCGC ATTCCGTGAT GACGGCGCGC GCAAGATGCT ACTCGCACTG TTCACTGCAC TCGGCGATCA GCACCCGCTC ACCGTCCAGG GGCGACGCGA TCTGGCGAAT GCAATGTTCT AA
|
Protein sequence | MSLVNKSASG SVIDVNERTF RAEVLERSRT VPVVVDFWAP WCGPCRVLGP ILERLAAEAK GAWILAKLNV DENPRLAQMF QVQGIPAVKA FRDGRVVDEF TGALPESQVR AWLKRIMPPP PASPADRLAA EAAAIEERDP LGAKARYESA LSFDPNHSAS LFGLGRLMLM AGDPAGAEML KKVPSDAPQA KQAQAWLALA DLIAEAEETN PSTLLERIEQ NPADLEARWL LAAHQLRGQR YADAIQTLLA IVMRNRAFRD DGARKMLLAL FTALGDQHPL TVQGRRDLAN AMF
|
| |