Gene RoseRS_1818 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_1818 
Symbol 
ID5208777 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp2243674 
End bp2244555 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content64% 
IMG OID640595426 
Productthioredoxin 
Protein accessionYP_001276158 
Protein GI148655953 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3118] Thioredoxin domain-containing protein 
TIGRFAM ID[TIGR01068] thioredoxin 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0314014 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCTCTCG TCAACAAAAG CGCGAGCGGT TCTGTCATCG ATGTCAACGA ACGCACCTTC 
CGCGCCGAGG TGCTCGAACG CTCACGCACG GTTCCGGTTG TCGTTGATTT CTGGGCGCCC
TGGTGCGGTC CCTGCCGCGT GCTGGGTCCC ATTCTGGAAC GGCTGGCTGC CGAGGCGAAA
GGCGCCTGGA TTCTGGCAAA ACTGAATGTG GACGAGAATC CGCGCCTGGC GCAGATGTTC
CAGGTCCAGG GCATCCCGGC GGTCAAAGCG TTTCGCGATG GCCGGGTGGT GGACGAATTT
ACCGGCGCGC TGCCCGAATC GCAGGTGCGC GCGTGGCTGA AGCGCATCAT GCCGCCGCCG
CCCGCTTCGC CTGCCGACCG TCTGGCGGCG GAGGCGGCAG CGATTGAGGA GCGTGATCCG
CTCGGCGCCA AAGCGCGGTA TGAAAGCGCA CTCTCGTTCG ATCCCAATCA TAGCGCCAGC
CTGTTTGGGT TGGGGCGCCT GATGCTCATG GCGGGCGACC CGGCAGGCGC CGAAATGTTG
AAGAAGGTTC CGTCCGACGC GCCACAGGCG AAACAGGCGC AGGCATGGCT GGCGCTCGCC
GATCTGATCG CCGAAGCGGA AGAGACCAAT CCGTCAACGC TGTTGGAGCG CATTGAGCAG
AATCCAGCGG ATCTCGAGGC GCGCTGGTTG CTGGCGGCGC ATCAACTGCG CGGGCAACGC
TACGCCGATG CGATCCAGAC CCTGCTGGCA ATTGTTATGC GCAATCGCGC ATTCCGTGAT
GACGGCGCGC GCAAGATGCT ACTCGCACTG TTCACTGCAC TCGGCGATCA GCACCCGCTC
ACCGTCCAGG GGCGACGCGA TCTGGCGAAT GCAATGTTCT AA
 
Protein sequence
MSLVNKSASG SVIDVNERTF RAEVLERSRT VPVVVDFWAP WCGPCRVLGP ILERLAAEAK 
GAWILAKLNV DENPRLAQMF QVQGIPAVKA FRDGRVVDEF TGALPESQVR AWLKRIMPPP
PASPADRLAA EAAAIEERDP LGAKARYESA LSFDPNHSAS LFGLGRLMLM AGDPAGAEML
KKVPSDAPQA KQAQAWLALA DLIAEAEETN PSTLLERIEQ NPADLEARWL LAAHQLRGQR
YADAIQTLLA IVMRNRAFRD DGARKMLLAL FTALGDQHPL TVQGRRDLAN AMF